New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 2670076101 (1.020)3 (0.030) 3/234 NT 3.0% intergenic (+13/+69) yicL/USA300HOU_2525 DMT superfamily drug/metabolite transporter/esterase
?CP000730 = 2670127 101 (1.120)intergenic (+64/+18) yicL/USA300HOU_2525 DMT superfamily drug/metabolite transporter/esterase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 144 total aligned reads displayed.

CCGTTATCGCAAGCAGTCTATGGTTACATGTGGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTATCGGAAATACTGGATAAATATG  >  CP000730/2669936‑2670216
                                                                                                                                            |                                                                                                                                             
ccGTTAGCGCAATCAGTCTATTGTTACATGCTGCATTCAAACCATTTCAAATCTTATGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATA                                                                                                                                               <  1:1133889‑M1/141‑1 (MQ=255)
 cGTTATCGCAAGCAGTCTATGGTTACATGTGGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACATGAAACATTAGATGAATAAGAAAACTCTGATaa                                                                                                                                              >  1:1141574/1‑141 (MQ=255)
   ttATCGCAAGCAGTCTATGGTTACATGTGGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATc                                                                                                                                            <  2:468876/141‑1 (MQ=255)
   ttATCGCAAGCAGTCTATGGTTACATGTGGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATc                                                                                                                                            <  1:28548/141‑1 (MQ=255)
   ttATCGCAAACAGTCTATGGTTACATGTGGCATTCAAACCATTTCAAATCGTAAGCATCACTCTTATACTGATTTTAATTCTATTACTATCACTTAAAAAACCACCCACAACATAAGATAAATAAAAAAACTCTGATAATc                                                                                                                                            >  2:623060/1‑141 (MQ=255)
           aGCAGTCTATGGTTACATGTGGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGc                                                                                                                                    >  2:956271/1‑141 (MQ=255)
           aGCAGTCTATGGTTACATGTGGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGc                                                                                                                                    >  2:667226/1‑141 (MQ=255)
                 cTATGGTTACATGTGGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTaa                                                                                                                              >  2:9944/1‑141 (MQ=255)
                 cTATGGTTACATGTGGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTaa                                                                                                                              <  2:1160243/141‑1 (MQ=255)
                     ggTTACATGTGGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACtat                                                                                                                          >  1:598310/1‑141 (MQ=255)
                     ggTTACATGTGGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACtat                                                                                                                          <  1:388071/141‑1 (MQ=255)
                            tgtgGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTaa                                                                                                                   <  2:509618/141‑1 (MQ=255)
                            tgtgGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTaa                                                                                                                   >  1:328556/1‑141 (MQ=255)
                              tgGCATTCATACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTaaca                                                                                                                 >  1:1051869/1‑141 (MQ=255)
                              tgGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTaaca                                                                                                                 >  2:915956/1‑141 (MQ=255)
                               ggCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTaacaa                                                                                                                >  1:631008/1‑141 (MQ=255)
                                      aaaCCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGtt                                                                                                         <  1:754464/141‑1 (MQ=255)
                                       aaCCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTa                                                                                                        >  2:638655/1‑141 (MQ=255)
                                       aaCCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTa                                                                                                        >  1:422247/1‑141 (MQ=255)
                                        aCCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTAc                                                                                                       >  1:295910/1‑141 (MQ=255)
                                        aCCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTAc                                                                                                       <  2:552889/141‑1 (MQ=255)
                                         ccATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTAcc                                                                                                      >  2:434726/1‑141 (MQ=255)
                                         ccATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTAcc                                                                                                      >  1:682390/1‑141 (MQ=255)
                                         ccATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTAcc                                                                                                      <  2:185859/141‑1 (MQ=255)
                                            tttCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTta                                                                                                   >  1:774208/1‑141 (MQ=255)
                                            tttCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTta                                                                                                   >  2:105965/1‑141 (MQ=255)
                                            tttCAAATCGTAGGCATAATTCTTATTATGATTTTAATTTTCTTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTta                                                                                                   >  2:413646/1‑141 (MQ=255)
                                               cAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAg                                                                                                >  2:907281/1‑141 (MQ=255)
                                               cAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAg                                                                                                >  2:178739/1‑141 (MQ=255)
                                                aaaTCGTAGTCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAgg                                                                                               >  1:1047354/1‑141 (MQ=255)
                                                 aaTCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGt                                                                                              >  1:1008590/1‑141 (MQ=255)
                                                    cGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATAACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGAt                                                                                           >  1:698160‑M2/1‑140 (MQ=255)
                                                     gTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGAta                                                                                          <  2:923715‑M2/141‑3 (MQ=255)
                                                      tAGGCATCATTCTTAGTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAtcacctataaggtaactacgttgttaaataatagttacttgctaaagtgattat                                                                                         <  1:811520‑M1/141‑55 (MQ=255)
                                                        ggCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGAtatca                                                                                       >  1:558564‑M2/1‑136 (MQ=255)
                                                         gCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGAtatcag                                                                                      >  2:763270‑M2/1‑135 (MQ=255)
                                                              atTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGAtatcagagttt                                                                                 >  1:802409‑M2/1‑130 (MQ=255)
                                                              atTCTAATTATGATTTTAATTTTATTACTATCACTTAAATGACAACCTGAAACATTAGATAAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTGACCTTATAGGTGAtatcagagttt                                                                                 >  2:1004866‑M2/1‑130 (MQ=255)
                                                               ttCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAtcacctataaggtaactacgttgttaaataatagttacttgctaaagtgattatcagagtttt                                                                                <  2:812597‑M1/141‑64 (MQ=255)
                                                                tCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGttttt                                                                               <  1:939885/141‑1 (MQ=255)
                                                                 cTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGtttttt                                                                              <  1:1114517/141‑1 (MQ=255)
                                                                   tattatGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTttttat                                                                            >  2:206106/1‑141 (MQ=255)
                                                                   tattatGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTttttat                                                                            >  1:605068/1‑141 (MQ=255)
                                                                    attatGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTttttatt                                                                           >  2:552979/1‑141 (MQ=255)
                                                                     ttatGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTttttattt                                                                          <  2:215012/141‑1 (MQ=255)
                                                                       atGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTttttatttta                                                                        >  1:422153/1‑141 (MQ=255)
                                                                           ttttaattttaTTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTta                                                                   >  1:553660/1‑141 (MQ=255)
                                                                            tttaattttaTTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGAtat                                                                                         <  1:301743‑M2/119‑4 (MQ=255)
                                                                            tttaattttaTTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTtaa                                                                  >  2:808749/1‑141 (MQ=255)
                                                                             ttaattttaTTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTtaat                                                                 <  1:370890/141‑1 (MQ=255)
                                                                             ttaattttaTTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTtaat                                                                 >  2:885364/1‑141 (MQ=255)
                                                                             ttaattttaTTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTtaat                                                                 <  1:508307/141‑1 (MQ=255)
                                                                             ttaattttaTTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTtaat                                                                 >  2:230288/1‑141 (MQ=255)
                                                                               aattttaTTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTtaataa                                                               >  1:1128568/1‑141 (MQ=255)
                                                                                attttaTTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTaataat                                                              <  1:1059928/141‑1 (MQ=255)
                                                                                 ttttaTTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAataata                                                             >  1:305052/1‑141 (MQ=255)
                                                                                   ttattaCTATCACTTAAAAGACAACCTGATACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACATTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATAtt                                                           <  2:516193/141‑1 (MQ=255)
                                                                                   ttattaCTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATAtt                                                           >  1:413749/1‑141 (MQ=255)
                                                                                   ttattaCTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATAtt                                                           >  1:1090232/1‑141 (MQ=255)
                                                                                   ctattaCCATCACTTAAAAGACACCCTGAAACATTAGATGACTACGAACAGAAAGATAGTCTTTCTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAACAtt                                                           >  2:1134556/2‑141 (MQ=255)
                                                                                          tATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACt                                                    >  1:594372/1‑141 (MQ=255)
                                                                                              aCTTAAATGACAACCTGTAACATTAGATGAATAAGAAACCTCGGATAATCACTTTAATCAGTACCTATTATTTAACAACGTAGTTACCTTATAGTTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCTCttatt                                                <  2:779721/141‑4 (MQ=255)
                                                                                              aCTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGt                                                <  2:871603/141‑1 (MQ=255)
                                                                                                 tAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGtata                                             <  1:732658/141‑1 (MQ=255)
                                                                                                   aaaGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATaaa                                           >  1:370630/1‑141 (MQ=255)
                                                                                                   aaaGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATaaa                                           >  1:530098/1‑141 (MQ=255)
                                                                                                   aaaGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCACAGTTTTTTATTTTAGTTAATAAAATTTTTCACTTGGAATaaa                                           >  2:591831/1‑141 (MQ=255)
                                                                                                       aCAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGc                                       >  2:180385/1‑141 (MQ=255)
                                                                                                         aaCCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGcgt                                     >  2:877807/1‑141 (MQ=255)
                                                                                                         aaCCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGcgt                                     >  2:980893/1‑141 (MQ=255)
                                                                                                          aCCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGcgtc                                    <  1:98653/141‑1 (MQ=255)
                                                                                                            cTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGcgtcgt                                  <  2:790812/141‑1 (MQ=255)
                                                                                                              gAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGtcgtcg                                >  1:816918/1‑141 (MQ=255)
                                                                                                               aaaCATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGc                               >  1:497373/1‑141 (MQ=255)
                                                                                                                 aCATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGctc                             <  1:640532/141‑1 (MQ=255)
                                                                                                                 aCATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGctc                             <  1:802879/141‑1 (MQ=255)
                                                                                                                 aCATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGctc                             <  1:962598/141‑1 (MQ=255)
                                                                                                                    ttAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCAAAAAATATAAAAAGCGTCGTCGCTCTgg                          <  2:758886/141‑1 (MQ=255)
                                                                                                                    ttAGATGAATAAGAAAACACTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTgg                          <  1:170629/141‑1 (MQ=255)
                                                                                                                       gATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGAAAAATAATTTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTAt                       <  1:871083/141‑1 (MQ=255)
                                                                                                                           aaTAAGAAAACTCTGATAATCTCTTTAGCAATTTACTATTATTTAACAACGTAGTTACCTTATTGTTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTGTCACTTGTTATAAAAAGCGTCGTCGTTCTGGTATCGGa                   <  2:358680/141‑1 (MQ=255)
                                                                                                                           aaTAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTATCGGa                   >  1:1007990/1‑141 (MQ=255)
                                                                                                                           aaTAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTATCGGa                   <  2:524015/141‑1 (MQ=255)
                                                                                                                               aGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTTGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCTTCGCTCTGGTATCTGAAATa               >  2:444529/1‑141 (MQ=255)
                                                                                                                               aGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCTTTTTTTATAAAAACCGTCGTCGCTCTGGTATCGGAAATa               >  2:583066/1‑141 (MQ=255)
                                                                                                                                gAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATACAAAGCGTCGTCGCTCTGGTATCGGAAATAc              >  2:388728/1‑141 (MQ=255)
                                                                                                                                 aaaaCTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTATCGGAAATACt             >  1:132772/1‑141 (MQ=255)
                                                                                                                                   aaCTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGAtatcagagttttcttattcatctaatgtttcaggttgtcttttaagtgatagtaataaaattaaaatcataataagaatg            <  2:259606‑M2/141‑81 (MQ=255)
                                                                                                                                   aaCTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTATCGGAAATACTgg           >  2:206762/1‑141 (MQ=255)
                                                                                                                                      tctGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTATCGGAAATACTGGATa        <  1:899846/141‑1 (MQ=255)
                                                                                                                                       ctGATAtcacctataaggtaactacgttgttaaataatagttacttgctaaagtgattatcagagttttcttattcatctaatgtttcaggttgtcttttaagtgatagtaataaaattaaaatcataataagaatgatgc        >  2:763270‑M1/1‑6 (MQ=255)
                                                                                                                                         gATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTATCGGAAATACTGGATAAat     <  2:1020554/141‑1 (MQ=255)
                                                                                                                                         gATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTATCGGAAATACTGGATAAat     <  2:664687/141‑1 (MQ=255)
                                                                                                                                          atatcacctataaggtaactacgttgttaaataatagttacttgctaaagtgattatcagagttttcttattcatctaatgtttcaggttgtcttttaagtgatagtaataaaattaaaatcataataagaatgatgccta     <  2:526648‑M1/141‑139 (MQ=255)
                                                                                                                                          atatcacctataaggtaactacgttgttaaataatagttacttgctaaagtgattatcagagttttcttattcatctaatgtttcaggttgtcttttaagtgatagtaataaaattaaa                           >  2:301743‑M1/1‑3 (MQ=255)
                                                                                                                                          aTAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGAtatcagagttttcttattcatctaatgtttcaggttgtcttttaagtgatagtaataaaattaaaatcatactaagaatgatgccta     <  1:811520‑M2/141‑88 (MQ=255)
                                                                                                                                          aTAATCACTTTAGCAAGTAACTATTATTTAACAACGGATTTACCTTATAGGTGATATCAGATTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTATCGGAAATACTGGATAAata    <  1:950301/141‑1 (MQ=255)
                                                                                                                                           aaaTCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTATCGGAAATACTGGATAAatat   <  2:487304/140‑1 (MQ=255)
                                                                                                                                            aaTCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATCAAAAGCGTCGCCGCTTTGGTAGCGGAAATACTGGATAAATATg  <  2:53855/141‑1 (MQ=255)
                                                                                                                                            aaTCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTATCGGAAATACTGGATAAATATg  <  1:481837/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                             
CCGTTATCGCAAGCAGTCTATGGTTACATGTGGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAATTTTATTACTATCACTTAAAAGACAACCTGAAACATTAGATGAATAAGAAAACTCTGATAATCACTTTAGCAAGTAACTATTATTTAACAACGTAGTTACCTTATAGGTGATATCAGAGTTTTTTATTTTAGTTAATAATATTTTTCACTTGGTATAAAAAGCGTCGTCGCTCTGGTATCGGAAATACTGGATAAATATG  >  CP000730/2669936‑2670216

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.