BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2682927	117 (1.180)	4 (0.040)	3/240	NT	3.5%	intergenic (‑106/‑148)	mvaA/mvaS	hydroxymethylglutaryl‑CoA reductase/hydroxymethylglutaryl‑CoA synthase
*	?	CP000730	= 2682968	115 (1.250)	4 (0.040)	3/240	NT	3.5%	intergenic (‑147/‑107)	mvaA/mvaS	hydroxymethylglutaryl‑CoA reductase/hydroxymethylglutaryl‑CoA synthase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 147 total aligned reads displayed.

TAAATGTCGAAAATTCTTATCTAAATTTTGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTTATAAATTTGAAAGGATGTA  >  CP000730/2682789‑2683067

tAAATGTCGAAAATTCTTATCTAAATTTTGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTg                                                                                                                                            >  2:828448/1‑141 (MQ=255)

    tGTCGAAAATTCTTATCTAAATTTTGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACtt                                                                                                                                        >  2:75750/1‑141 (MQ=255)

      tCGAAAATTCTTATCTAAATTTTGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTta                                                                                                                                      <  1:522795/141‑1 (MQ=255)

       cGAAAATTCTTATCTAAATTTTGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTtaa                                                                                                                                     <  1:763904/141‑1 (MQ=255)

       cGAAAATTCTTATCTAAATTTTGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTtaa                                                                                                                                     >  1:1123650/1‑141 (MQ=255)

         aaaaTTCTTATCTAAATTTTGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTtaaaa                                                                                                                                   <  2:162735/141‑1 (MQ=255)

         aaaaTTCTTATCTAAATTTTGCATGGACGTACTCCTTTTACTTCACAGAATTTTTAACCTTTCAATCACTACTATGTTTACCACAAAATAACGTCATTCGTCTTAAATTTCAATTGAATAATTGTCGTTTTGACTTtaaaa                                                                                                                                   <  1:621211/141‑1 (MQ=255)

                 tATCTAAATTTTGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACaa                                                                                                                           >  1:181354/1‑141 (MQ=255)

                    cTAAATTTTGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGt                                                                                                                        <  1:637375/141‑1 (MQ=255)

                     tAAATTTTGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTa                                                                                                                       <  2:1117587/141‑1 (MQ=255)

                        aTTTTGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAAt                                                                                                                    <  1:194595/141‑1 (MQ=255)

                         ttttGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAAtt                                                                                                                   <  2:1089165/141‑1 (MQ=255)

                         ttttGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAAtt                                                                                                                   <  2:1013467/141‑1 (MQ=255)

                           ttGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTaa                                                                                                                 <  2:378174/141‑1 (MQ=255)

                            tGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTaaa                                                                                                                >  1:865739/1‑141 (MQ=255)

                            tGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTaaa                                                                                                                >  2:1032386/1‑141 (MQ=255)

                             gCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTTAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTaaaa                                                                                                               >  1:1166828/1‑141 (MQ=255)

                              cATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAAc                                                                                                              >  2:108958/1‑141 (MQ=255)

                              cATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAAc                                                                                                              >  2:26764/1‑141 (MQ=255)

                              cATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAAc                                                                                                              >  2:1053304/1‑141 (MQ=255)

                               aTGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACg                                                                                                             <  2:886037/141‑1 (MQ=255)

                                tGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGc                                                                                                            >  1:867409/1‑141 (MQ=255)

                                 ggACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCt                                                                                                           >  1:389678/1‑141 (MQ=255)

                                        cTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTTTCGTTTTGACTTTAAAATAAAACAAGGAAAATTAAAACGCTTACAAGa                                                                                                    <  1:1014788‑M2/141‑2 (MQ=255)

                                          ccTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGaaa                                                                                                  <  1:840919‑M2/141‑4 (MQ=255)

                                            ttttACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTcttgtaagcgttttaatttaccttgttttattttaaagtcaaaacg                                                                                                <  2:550733‑M1/141‑47 (MQ=255)

                                            ttttACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTcttgtaagcgttttaatttaccttgttttattttaaagtcaaaacg                                                                                                <  2:550789‑M1/141‑47 (MQ=255)

                                            ttttACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGaaacg                                                                                                <  2:1105901‑M2/141‑6 (MQ=255)

                                             tttACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGaaacga                                                                                               <  2:898747‑M2/141‑7 (MQ=255)

                                               tACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTcttgtaagcgttttaatttaccttgttttattttaaagtcaaaacgaca                                                                                             <  2:873995‑M1/141‑50 (MQ=255)

                                                aCTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGaaacgacaa                                                                                            <  2:685228‑M2/141‑10 (MQ=255)

                                                 cTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACaaa                                                                                           <  2:1188011/141‑1 (MQ=255)

                                                 cTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACaaa                                                                                           >  2:164356/1‑141 (MQ=255)

                                                 cTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACaaa                                                                                           >  1:493167/1‑141 (MQ=255)

                                                  ttCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAAt                                                                                          <  2:1008164/141‑1 (MQ=255)

                                                    cacaTAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATc                                                                                         <  1:181796/140‑1 (MQ=255)

                                                    cacaTAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATc                                                                                         >  2:181796/1‑140 (MQ=255)

                                                       tgaaTTTNTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCAttt                                                                                     <  2:897671/139‑1 (MQ=255)

                                                       aTAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCAttt                                                                                     <  1:729315/141‑1 (MQ=255)

                                                       aTAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCAttt                                                                                     <  2:843330/141‑1 (MQ=255)

                                                        tAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCAtttt                                                                                    <  2:462545/141‑1 (MQ=255)

                                                             tttAACCTTTTAATCATTTTTTTTTGTATCACTAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTGTAAAATAAAACAAGGTAATTTAAAACGCTTACAAGAAACGACAAATCATTTTTAAAt                                                                               <  2:772772/141‑1 (MQ=255)

                                                             tttAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAAt                                                                               >  2:357537/1‑141 (MQ=255)

                                                               tAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAAttt                                                                             <  2:25794/141‑1 (MQ=255)

                                                                aaCATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTa                                                                            >  1:293831/1‑141 (MQ=255)

                                                                 aaaTTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAg                                                                           <  2:447527/139‑1 (MQ=255)

                                                                 aCATTTCAATCACTACTATTTTTATTTTTTTTTAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAAACATTTTTAAATTTAg                                                                           >  2:502964/1‑141 (MQ=255)

                                                                 aCATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAg                                                                           >  1:82025/1‑141 (MQ=255)

                                                                   aTTTCAATCACTACTATTTTTACCACAATATAACGTCATTCGTCTTAAAATTAAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGta                                                                         <  2:801314/141‑1 (MQ=255)

                                                                   aTTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAGTTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGta                                                                         <  2:949631/141‑1 (MQ=255)

                                                                   aTTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGta                                                                         <  2:390766/141‑1 (MQ=255)

                                                                   aTTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGta                                                                         <  1:750094/141‑1 (MQ=255)

                                                                    tttCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGtat                                                                        <  2:610344/141‑1 (MQ=255)

                                                                     ttCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGtata                                                                       >  1:92410/1‑141 (MQ=255)

                                                                     ttCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAAATTAGtata                                                                       >  2:729862/1‑141 (MQ=255)

                                                                      tCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTatat                                                                      <  2:1160730/141‑1 (MQ=255)

                                                                             ctactaTTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGGATAATCAGCCTATAGACTTAAAAAGGAAACAAGGTAGATTGAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCGTTg                                                               >  1:1009642/1‑141 (MQ=255)

                                                                              tactaTTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGt                                                              <  1:1053224/141‑1 (MQ=255)

                                                                                ctaTTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGtat                                                            <  1:678320/141‑1 (MQ=255)

                                                                                ctaTTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGtat                                                            <  1:1061804/141‑1 (MQ=255)

                                                                                 taTTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGtata                                                           >  1:723113/1‑141 (MQ=255)

                                                                                  aTTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATaa                                                          <  1:904523/141‑1 (MQ=255)

                                                                                    ttttACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATaaaa                                                        >  1:552367/1‑141 (MQ=255)

                                                                                    tttgtggtaaaaaTAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTATTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATaaaa                                                        >  1:50941/10‑141 (MQ=255)

                                                                                      ttACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAAtt                                                      >  1:1094573/1‑141 (MQ=255)

                                                                                        aCCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAg                                                    <  2:581950/141‑1 (MQ=255)

                                                                                         ccACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGc                                                   >  2:548633/1‑141 (MQ=255)

                                                                                         ccACAAAATAACGTCATTCGTATTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAACATAAAACAAGGTAAATTACAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTTTTTGTATAAAATTAGc                                                   >  1:280082/1‑141 (MQ=255)

                                                                                          cacaAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCa                                                  <  2:491834/141‑1 (MQ=255)

                                                                                                   aCGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCtgat                                         <  1:216161/141‑1 (MQ=255)

                                                                                                   aCGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCtgat                                         <  2:538139/141‑1 (MQ=255)

                                                                                                    cGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCtgata                                        >  2:714120/1‑141 (MQ=255)

                                                                                                     gTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCtgatat                                       >  1:537907/1‑141 (MQ=255)

                                                                                                     gTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCtgatat                                       <  1:1056942/141‑1 (MQ=255)

                                                                                                      tCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCtgatatg                                      <  1:233491/141‑1 (MQ=255)

                                                                                                        aTTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCtgatatgat                                    >  2:377446/1‑141 (MQ=255)

                                                                                                             tCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAg                               <  2:123688/141‑1 (MQ=255)

                                                                                                               ttAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAgtg                             >  2:182080/1‑141 (MQ=255)

                                                                                                                tAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAgtgt                            <  1:438202/141‑1 (MQ=255)

                                                                                                                 aaaaTTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGtt                           >  1:789615/1‑141 (MQ=255)

                                                                                                                   aaTTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGc                         <  1:1073742/141‑1 (MQ=255)

                                                                                                                         aTTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTtat                   >  2:953240/1‑141 (MQ=255)

                                                                                                                         aTTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTtat                   <  1:309520/141‑1 (MQ=255)

                                                                                                                          ttGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATGTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTtata                  >  1:1130118/1‑141 (MQ=255)

                                                                                                                            gAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAATCGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTTATaaa                <  1:20439/141‑1 (MQ=255)

                                                                                                                              ataatTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTGTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTTATAAAtt              >  1:972192/1‑141 (MQ=255)

                                                                                                                               taatTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTTATAAAttt             <  2:23342/141‑1 (MQ=255)

                                                                                                                                  ttggctttttGAATTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTTATAAATTTGaa          <  2:902893/135‑1 (MQ=255)

                                                                                                                                  ttGTCGTTTcttgtaagcgttttaatttaccttgttttattttaaagtcaaaacgacaattattcaattgaattttaagacgaatgacgttattttgtggtaaaaatagtagtgattgaaatgttaaaaattatgtgaagt          <  2:685228‑M1/141‑133 (MQ=255)

                                                                                                                                  ttGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGaaacgacaattattcaattgaattttaagacgaatgacgttattttgtggtaaaaatagtagtgattgaaatgttaaaaattatgtgaagt          <  2:559845‑M2/141‑92 (MQ=255)

                                                                                                                                      tgTTTTAACTATAAAATAAAGCAAGGTAAATTAAAACGCTTACAAGAAACGTCAAATCATTTTTAAATTTAGTGTATTTCTTTGTATAAGATAAGCATATTCTGATATGATACAAGTGTTGCTTTTATAAATTTGAAAGGa      >  1:1172207/2‑141 (MQ=255)

                                                                                                                                      cGTTTcttgtaagcgttttaatttaccttgttttattttaaagtcaaaacgacaattattcaattgaattttaagacgaatgacgttattttgtggtaaaaatagtagtgattgaaatgttaaaaattatgtgaagtaaaa      <  2:1179907‑M1/141‑137 (MQ=255)

                                                                                                                                      cGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGaaacgacaattattcaattgaattttaagacgaatgacgttattttgtggtaaaaatagtagtgattgaaatgttaaaaattatgtgaagtaaaa      <  2:550789‑M2/141‑96 (MQ=255)

                                                                                                                                      cGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTTATAAATTTGAAAGGa      >  2:599433/1‑141 (MQ=255)

                                                                                                                                      cGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTTATAAATTTGAAAGGa      >  1:841603/1‑141 (MQ=255)

                                                                                                                                      cGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTTATAAATTTGAAAGGa      <  1:553424/141‑1 (MQ=255)

                                                                                                                                      cGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTATATAAATTTGAAAGGa      >  2:652483/1‑141 (MQ=255)

                                                                                                                                         tttGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTTATAAATTTGAAAGGATGt   <  2:2325/141‑1 (MQ=255)

                                                                                                                                         tttGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTTATAAATTTGAAAGGATGt   <  1:1082695/141‑1 (MQ=255)

                                                                                                                                          tcttgtaagcgttttaattttccttgttttattttaaagtcaaaacgaaaattattcaattgaattttaagacgaatgacgttattttgtggtaaaaatagtagtgattgaaatgttaaaaattatgtgaagtaaaaggag  <  1:1014788‑M1/141‑141 (MQ=255)

TAAATGTCGAAAATTCTTATCTAAATTTTGCATGGACGTACTCCTTTTACTTCACATAATTTTTAACATTTCAATCACTACTATTTTTACCACAAAATAACGTCATTCGTCTTAAAATTCAATTGAATAATTGTCGTTTTGACTTTAAAATAAAACAAGGTAAATTAAAACGCTTACAAGAAACGACAAATCATTTTTAAATTTAGTATATTTCTTTGTATAAAATTAGCATATTCTGATATGATACAAGTGTTGCTTTTATAAATTTGAAAGGATGTA  >  CP000730/2682789‑2683067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.