| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 553211 = | 53 (1.270) | 3 (0.080) | 3/236 | NT | 6.2% | intergenic (+178/‑2881) | folB/rrf2 | dihydroneopterin aldolase/5S ribosomal RNA |
| ? | CP000730 | 553257 = | 43 (1.130) | intergenic (+224/‑2835) | folB/rrf2 | dihydroneopterin aldolase/5S ribosomal RNA | |||||
GTTTTGGTAAATCTATCATTTCTTCTCCATACAACAAAATATCCACATCTAAAGTTCTAGGACCCCATCGTTCCTTTCTAATACGGTGTAAACATTCTTCTGTCTTCAAACAACATTCCAACAGTTGTAATACTGTGAGTGTTGTTTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/553360‑553211‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttgtttgaaGACAGAAGAATGTTTACACCGTATTAGAAAGGAACGATGGGGTCCTAGAACTTTAGATGTGGATATTTTGTTGTATGGAGAAGAAATGATAGATTTACCAAAACTGTCGGTGCCACATCCGAGAATGAATGAACGT > CP000730/553257‑553392 GTTTTGGTAAATCTATCATTTCTTCTCCATACAACAAAATATCCACATCTAAAGTTCTAGGACCCCATCGTTCCTTTCTCATCCAGAGTAAACATTCTTCTGTCTTCAAACAACATTCCAACAGTTGTAATACTGTGAGTG > 1:31504/1‑141GTTTTGGTAAATCTATCATTTCTTCTCCATACAACAAAATATCCACATCTAAAGTTCTAGGACCCCATCGTTCCTTTCTAATACGGTGTAAACATTCTTCTGTCTTCAAACAACATTCCAACAGTTGTAATACTGTGAGTG > 2:361298/1‑141GTTTTGGTAAATCTATCATTTCTTCTCCATACAACAAAATATCCACATCTAAAGTTCTAGGACCCCATCGTTCCTTTCTAATACGGTGTAAACATTCTTCTGTCTTCAAACAACATTCCAACAGTTGTAATACTGTGAGTG > 1:270658/1‑141 TTTGGTAAATCTATCATTTCTTCTCCATACAACAAAATATCCACATCTAAAGTTCTAGGACCCCATCGTTCCTTTCTAATACGGTGTAAACATTCTTCTGTCTTCAAACAACATTCCAACAGTTGTAATACTGTGAGTGTT > 1:409902/1‑141 TGGTAAATCTATCATTTCTTCTCCATACAACAAAATATCCACATCTAAAGTTCTAGGACCCCATCGTTCCTTTCTAATACGGTGTAAACATTCTTCTGTCTTCAAACAACATTCCAACAGTTGTAATACTGTGAGTGTTGT < 1:159911/141‑1 TGGTAAATCTATCATTTCTTCTCCATACAACAAAATATCCACATCTAAAGTTCTAGGACCCCATCGTTCCTTTCTAATACGGTGTAAACATTCTTCTGTCTTCAAACAACATTCCAACAGTTGTAATACTGTGAGTGTTGT < 1:64598/141‑1 AACAACATTCCAACAGTTGTAATACTGTGAGTGTTGTTTGCAGATGAAAGAATGTTTACACCGTATTAGAAAGGAACGATGGGGTCCTAGAACTTTAGATGTGGATATTTTGTTGTATGGAGAAGAAATGATAGATTTACC > 1:366894/1‑141 CAACATTCCAACAGTTGTAATACTGTGAGTGTTGTTTGAAGACAGAAGAATGTTTACACCGTATTAGAAAGGAACGATGGGGTCCTAGAACTTTAGATGTGGATATTTTGTTGTATGGAGAAGAAATGATAGATTTACCAA > 1:62621/1‑141 ATTCCAACAGTTGTAATACTGTGAGTGTTGTTTGAAGACAGAAGAATGTTTACACCGTATTAGAAAGGAACGATGGGGTCCTAGAACTTTAGATGTGGATATTTTGTTGTATGGAGAAGAAATGATAGATTTACCAAAACT > 1:21294/1‑141 TGTTGTTTGAAGACAGAAGAATGTTTACACCGTATTAGAAAGGAACGATGGGGTCCTAGAACTTTAGATGTGGATATTTTGTTGTATGGAGAAGAAATGATAGATTTACCAAAACTGTCGGTGCCACATCCGAGAATGAAT > 2:422118/1‑141 TTGTTTGAAGACAGAAGAATTTTTTCTCCGGATTAGAATGGAACGATGGGGTCCTAGAACTTTAGATGTGGATATTTTGTTGTATGGAGAAGAAATGATAGATTTACCAAAACTGTCGGTGCCACATCCGAGAATGAATGA < 2:223850/141‑1 TTGAAGACAGAAGAATGTTTACACCGTATTAGAAAGGAACGATGGGGTCCTAGAACTTTAGATGTGGATATTTTGTTGTATGGAGAAGAAATGATAGATTTACCAAAACTGTCGGTGCCACATCCGAGAATGAATGAACGT < 2:64598/141‑1 GTTTTGGTAAATCTATCATTTCTTCTCCATACAACAAAATATCCACATCTAAAGTTCTAGGACCCCATCGTTCCTTTCTAATACGGTGTAAACATTCTTCTGTCTTCAAACAACATTCCAACAGTTGTAATACTGTGAGTGTTGTTTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/553360‑553211‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttgtttgaaGACAGAAGAATGTTTACACCGTATTAGAAAGGAACGATGGGGTCCTAGAACTTTAGATGTGGATATTTTGTTGTATGGAGAAGAAATGATAGATTTACCAAAACTGTCGGTGCCACATCCGAGAATGAATGAACGT > CP000730/553257‑553392 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |