| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 1697752 = | 37 (0.890) | 3 (0.080) | 3/226 | NT | 9.0% | intergenic (+8/+37) | rpsT/holA | ribosomal protein S20/possible DNA‑directed DNA polymerase III delta subunit |
| ? | CP000730 | 1697788 = | 28 (0.770) | intergenic (+44/+1) | rpsT/holA | ribosomal protein S20/possible DNA‑directed DNA polymerase III delta subunit | |||||
ATTATCAACTTGATGAATTATTGAATATTATAGATGCTTGTGCGGAAACTGATTATAAACTTAAATCATCATATATGGATAAACAGTTAATACTGGAATTATTCATTCTATCTTTATAAAAAATAAAAGTTCAAGCATGCGCTTGAACTTTTATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1697907‑1697752‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttgaacttttatttTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGTTGATAATGTCTTACTTGTCCTAACGC > CP000730/1697788‑1697926 ATTATCAACTTGATGAATTATTGAATATTATAGATGCTTGTGCGGAAACTGATTATAAACTTAAATCATCATATATGGATAAACAGTTAATACTGGAATTATTCATTCTATCTTTATAAAAAATAAAAGTTCAAGCATGCG > 1:202206/1‑141ATTATCAACTTGATGAATTATTGAATATTATAGATGCTTGTGCGGAAACTGATTATAAACTTAAATCATCATATATGGATAAACAGTTAATACTGGAATTATTCATTCTATCTTTATAAAAAATAAAAGTTCAAGCATGCG < 1:247005/141‑1 TTATCAACTTGATGAATTATTGAATATTATAGATGCTTGTGCGGAAACTGATTATAAACTTAAATCATCATATATGGATAAACAGTTAATACTGGAATTATTCATTCTATCTTTATAAAAAATAAAAGTTCAAGCATGCGC < 1:392834/141‑1 TCAACTTGATGAATTATTGAATATTATAGATGCTTGTGCGGAAACTGATTATAAACTTAAATCATCATATATGGATAAACAGTTAATACTGGAATTATTCATTCTATCTTTATAAAAAATAAAAGTTCAAGCATGCGCTTG < 1:234949/141‑1 ACTTGATGAATTATTGAATATTATAGATGCTTGTGCGGAAACTGATTATAAACTTAAATCATCATATATGGATAAACAGTTAATACTGGAATTATTCATTCTATCTTTATAAAAAATAAAAGTTCAAGCATGCGCTTGAAC > 1:368502/1‑141 TGAATTATTGAATATTATAGATGCTTGTGCGGAAACTGATTATAAACTTAAATCATCATATATGGATAAACAGTTAATACTGGAATTATTCATTCTATCTTTATAAAAAATAAAAGTTCAAGCATGCGCTTGAACTTTTAT > 1:72001/1‑141 TATAAACTTAAATCATCATATATGGATAAACAGTTAATACTGGAATTATTCATTCTATCTTTATAAAAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAA < 1:363545/137‑1 TATAAACTTAAATCATCATATATGGATAAACAGTTAATACTGGAATTATTCATTCTATCTTTATAAAAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAA > 2:363545/1‑137 GTTCAAGCATGCGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGT > 1:74594/1‑141 ATGCGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGTTGATAATG > 2:57174/1‑141 GCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGTTGATAATGTCTT > 1:65782/1‑141 TGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGTTGATAATGTCTTACT < 1:421110/141‑1 CTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGTTGATAATGTCTTACTTGTC > 2:153689/1‑141 TTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGTTGATAATGTCTTACTTGTCCT > 1:286045/1‑141 TATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTATGTTTATAATCAGTTTCCGCACAAGCATCTTTAATATTCAATAATTCATCAAGTTGATAATGTCTTACCTGTCCTAA > 2:120355/1‑141 TTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGTTGATAATGTCTTACTTGTCCTAACGC > 1:18050/1‑141 ATTATCAACTTGATGAATTATTGAATATTATAGATGCTTGTGCGGAAACTGATTATAAACTTAAATCATCATATATGGATAAACAGTTAATACTGGAATTATTCATTCTATCTTTATAAAAAATAAAAGTTCAAGCATGCGCTTGAACTTTTATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1697907‑1697752‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttgaacttttatttTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGTTGATAATGTCTTACTTGTCCTAACGC > CP000730/1697788‑1697926 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |