| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 1545880 | 33 (0.850) | 3 (0.080) | 3/258 | 5.8 | 8.7% | intergenic (‑183/+39) | engA/rpsA | GTP‑binding protein EngA/ribosomal protein S1 |
| ? | CP000730 | = 1545890 | 32 (0.890) | intergenic (‑193/+29) | engA/rpsA | GTP‑binding protein EngA/ribosomal protein S1 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TAATATCACATGAGACTGTGTATTCAAAATGAGTTTATTACTGTAATGATAAAAATCAGCACTTAAAACTTTATCTTTTTAAACACTTAGTTAAATTTGTCCACGTTATCATTCCGAGTATATTTTGTTACATAAAAATACTCCACATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1545732‑1545880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actccacatgTTTATGATTGCATGTGGAGTATTTTTATGTAACAAAATATACTCGGAATGATAACGTGGACAAATTTAACTAAGTGTTTAAAAAGATAAAGTTTTAAGTGCTGATTTTTATCATTACAGTAATAAACTCATTTTGAATA < CP000730/1545890‑1545752 TAATATCACATGAGACTGTGTATTCAAAATGAGTTTATTACTGTAATGATAAAAATCAGCACTTAAAACTTTATCTTTTTAAACACTTAGTTAAATTTGTCCACGTTATCATTCCGAGTATATTTTGTTACATAAAAATAC > 2:389806/1‑141 ACATGAGACTGTGTATTCAAAATGAGTTTATTACTGTAATGATAAAAATCAGCACTTAAAACTTTATCTTTTTAAACACTTAGTTAAATTTGTCCACGTTATCATTCCGAGTATATTTTGTTACATAAAAATACTCCACAT > 2:91845/1‑141 ACATGAGACTGTGTATTCAAAATGAGTTTATTACTGTAATGATAAAAATCAGCACTTAAAACTTTATCTTTTTAAACACTTAGTTAAATTTGTCCACGTTATCATTCCGAGTATATTTTGTTACATAAAAATACTCCACAT < 2:364790/141‑1 ATCAGCACTTAAAACTTTATCTTTTTAAACACTTAGTTAAATTTGTCCACGTTATCATTCCGAGTATATTTTGTTACATAAAAATACTCCACATGTTTATGATTGCATGTGGAGTATTTTTATGTAACAAAATATACTCGG < 1:365682/141‑1 TTTTTAAACACTTAGTTAAATTTGTCCACGTTATCATTCCGAGTATATTTTGTTACATAAAAATACTCCACATGTTTATGATTGCATGTGGAGTATTTTTATGTAACAAAA > 2:380529/1‑111 TTTTTAAACACTTAGTTAAATTTGTCCACGTTATCATTCCGAGTATATTTTGTTACATAAAAATACTCCACATGTTTATGATTGCATGTGGAGTATTTTTATGTAACAAAA < 1:380529/111‑1 ATGTTTATGATTGCATGTGGAGTATTTTTATGTAACAAAATATACTCGGAATGATAACGTGGACAAATTTAACTAAGTGTTTAAAAAGATAAAGTTTTAAGTGCTGATTTTTATCATTACAGTAATAAACTCATTTTGAAT < 2:433775/141‑1 TGTTTATGATTGCATGTGGAGTATTTTTATGTAACAAAATATACTCGGAATGATAACGTGGACAAATTTAACTAAGTAATTAAAAAGATAAAGTTTTAAGTGCTGATTTTTATCATTACAGTAATAAACTCATTTTGAATA < 2:415124/141‑1 TAATATCACATGAGACTGTGTATTCAAAATGAGTTTATTACTGTAATGATAAAAATCAGCACTTAAAACTTTATCTTTTTAAACACTTAGTTAAATTTGTCCACGTTATCATTCCGAGTATATTTTGTTACATAAAAATACTCCACATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1545732‑1545880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actccacatgTTTATGATTGCATGTGGAGTATTTTTATGTAACAAAATATACTCGGAATGATAACGTGGACAAATTTAACTAAGTGTTTAAAAAGATAAAGTTTTAAGTGCTGATTTTTATCATTACAGTAATAAACTCATTTTGAATA < CP000730/1545890‑1545752 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |