New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 1822717 =60 (0.770)3 (0.040) 3/238 NT 5.5% intergenic (+38/+208) USA300HOU_1697/ackA possible universal stress protein/acetate kinase
?CP000730 1822745 = 49 (0.680)intergenic (+66/+180) USA300HOU_1697/ackA possible universal stress protein/acetate kinase

GTACTGAAGAGTTACCAGCAGACTTCCAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCCTACATAT  >  CP000730/1822606‑1822885
                                                                                                                                           |                                                                                                                                            
gTACTGAAGAGTTACCAGCAGACTTCCAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGtttt                                                                                                                                             >  2:808929/1‑141 (MQ=255)
  aCTGAATAGTGACCAGCAGATTTTCAACTACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGtttttt                                                                                                                                           <  2:30033/141‑1 (MQ=255)
   cTGAAGAGTTACCAGCAGACTTCCAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGCTAATTTGAGGACTACGTGATCATTATGAGCCAAGTGCAACTTTCTGCACTTGGttttttt                                                                                                                                          >  1:178196/1‑140 (MQ=255)
   cTGAAGAGTTACCAGCAGACTTCCAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGtgttttt                                                                                                                                          >  1:707642/1‑140 (MQ=255)
   cTGAAGAGTTACCAGCAGACTTCCAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTa                                                                                                                                          >  1:764306/1‑141 (MQ=255)
      aaGAGTTACCAGCAGACTTCCAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTAttt                                                                                                                                       >  2:353382/1‑140 (MQ=255)
           actagtgtaatgtctcttttcacgaatatcttaaagaattaagtagtcgaagaagattatgaaaacattattaagtgagttttatttataaacaataaaaaaccaagtgcaactttctgcacttggttTTTTATTGTTtat                                                                                                                                  <  1:917722‑M2/13‑1 (MQ=255)
             aCCAGCAGACTTACAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTataa                                                                                                                                <  2:157652/141‑1 (MQ=255)
              ccAGCAGACGTCCAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTataaa                                                                                                                               <  1:465600/141‑1 (MQ=255)
                   agACTACCAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATaaaa                                                                                                                          <  2:599191/141‑1 (MQ=255)
                    gACTTCCAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAAc                                                                                                                         >  2:40075/1‑141 (MQ=255)
                    aaCTTCCAACCAAAAGTTGCAACAATTTAATTACGTTAAAAATATCAAAATTAAATATAGATGATCATTAGTTAACTACTTGACCATTATGAACCAAGTGCAACTTTCTGCACTTGGTGTTTTATTGTTTATAAAGAAAAc                                                                                                                         <  2:780901/140‑1 (MQ=255)
                     aCTTCCAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACt                                                                                                                        <  1:393283/141‑1 (MQ=255)
                      gtctcttttcacgaatatcttaaagaattaagtagtcgaagaagattatgaaaacattattaagtgagttttatttataaacaataaaaaaccaagtgcaactttctgcacttggttTTTTATTGTTTATAAATAAAACTc                                                                                                                       >  2:821979‑M2/118‑141 (MQ=255)
                      gtctcttttcacgaatatcttaaagaattaagtagtcgaagaagattatgaaaaaattattaagtgagttttatttataaataataaaaaaccaagtgcagaaagtggaactgggttTTTTATTGTTTCTAAATAAAActa                                                                                                                       >  1:821979‑M2/118‑140 (MQ=255)
                       ttCCAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGAGCATTAGATAGCTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATATATAAAACTcc                                                                                                                      <  2:163950/141‑2 (MQ=255)
                            aCCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTtaa                                                                                                                 >  1:478549/1‑141 (MQ=255)
                             ccACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTTCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTtaat                                                                                                                <  1:577276/141‑1 (MQ=255)
                             ccACAAGTTGCAACAACTCAATTACGTGAAAAATATAAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTtaat                                                                                                                >  2:924821/1‑141 (MQ=255)
                             ccACAAATAGCAACGGCACAATTACGTAAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTTCAACTTTCTGCGTTTGTTTTTTTATTGTTTATAACTTAAACTTACTtaaa                                                                                                                >  2:86259/1‑140 (MQ=255)
                             agacaAGTAGCAACAACTGGATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAGGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTtaat                                                                                                                >  2:86117/3‑141 (MQ=255)
                                caAGTAGTAACAACTAAATTACGTTAAAAATATAAAAATTAAATTTCGCTGATCATTAGATAACTACTTGATCATTATGAAACAAGTGCAACTTTCTGCACTTGGTTTTTTAGTGTTTATAAATAAAACTCACTTaataat                                                                                                             <  1:923835/141‑1 (MQ=255)
                                aaaGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTaataat                                                                                                             <  2:768173/140‑1 (MQ=255)
                                           aacTCAATTACGTTAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTATGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAAt                                                                                                  <  2:54545/141‑1 (MQ=255)
                                                     cGTAAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGac                                                                                        <  1:900775/141‑1 (MQ=255)
                                                      gTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGact                                                                                       <  2:766693/141‑1 (MQ=255)
                                                      gTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGact                                                                                       >  2:505931/1‑141 (MQ=255)
                                                         aaaaaTATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGactact                                                                                    <  2:478549/141‑1 (MQ=255)
                                                          aaaaTATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTCATAATGTTTTCATAATCTTCTTAGACTACtt                                                                                   >  2:431711/1‑141 (MQ=255)
                                                              tatCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGCTTTCATAATCTTCTTCGACTACTTAAtt                                                                               >  1:655156/1‑141 (MQ=255)
                                                                tCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCt                                                                             >  2:490972/1‑141 (MQ=255)
                                                                    aaTTAAACAGAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTaa                                                                         <  2:175792/141‑1 (MQ=255)
                                                                      ttAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGa                                                                       <  2:336244/141‑1 (MQ=255)
                                                                         aaTATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGatat                                                                    >  2:35212/1‑141 (MQ=255)
                                                                          atatAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGAGAtt                                                                   >  1:650234/1‑141 (MQ=255)
                                                                             tcgatgatCATTAGATAACTACTTGATCATTATGAATCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCGTAATCTTCTTCGACTACTTAATTATTTAAGATATTCGt                                                                <  1:524500/139‑1 (MQ=255)
                                                                             taGATGATCATTAGATAACTACTTGATCATTATGAACCTAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGt                                                                <  1:613511/141‑1 (MQ=255)
                                                                                     cATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAagag                                                        <  2:655156/141‑1 (MQ=255)
                                                                                       tagttttatttagaaacaataaaaAACCCAGTTCCACTTTCTGCACTTGGTTTTTTATTATTTATAAATAAAACTCACTTAATAATTTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGAc                                                      >  1:821979‑M1/25‑141 (MQ=255)
                                                                                       gagttttatttataaacaataaaaAACCAAGTGCAGAAAGTTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGAc                                                      >  2:821979‑M1/25‑141 (MQ=255)
                                                                                        tagataagccgttGAGCATTATGAACCAAGTCAGTCCTTCGGCACTTGGTTCACCCCGCTGTATGAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACa                                                     >  2:906340/12‑141 (MQ=255)
                                                                                        tAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGCCa                                                     >  2:659440/1‑141 (MQ=255)
                                                                                          gATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACAtt                                                   <  1:939517/141‑1 (MQ=255)
                                                                                          gATAACTACTGTTTCATTATGAACCAAGTGCAACTTTCTGCACTTGGCTGCTTGTTTTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACAtt                                                   <  1:358218/141‑1 (MQ=255)
                                                                                           aTAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTa                                                  >  2:163890/1‑141 (MQ=255)
                                                                                            tAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTac                                                 >  1:480071/1‑141 (MQ=255)
                                                                                             aaCTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAACTAAAACTCACTTAATAATGTTTTCCTAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGACAAGACCCATTacc                                                >  2:409524/1‑140 (MQ=255)
                                                                                                tactTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTa                                             <  1:274481/141‑1 (MQ=255)
                                                                                                  ataaacaataaaaAACCAAGTGCAGAAAGTTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGt                                           <  1:917722‑M1/128‑1 (MQ=255)
                                                                                                   ttGATAATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGtt                                          <  2:304511/141‑1 (MQ=255)
                                                                                                   tggattgttATGAGCCNAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCGCTTACTAATGTCTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGtt                                          <  1:861153/134‑1 (MQ=255)
                                                                                                    tGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTa                                         <  1:881786/141‑1 (MQ=255)
                                                                                                      aTCATTATGGACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTGTAAATAAATCTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTTAAAAGAGACATTACACTAGTTAAt                                       >  2:430346/1‑141 (MQ=255)
                                                                                                      aTCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAATAGACATTACACTAGTTAAt                                       >  2:934592/1‑141 (MQ=255)
                                                                                                      aTCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAAt                                       >  1:907953/1‑141 (MQ=255)
                                                                                                       tgatgaTGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAGGATATTCGTGAAAAGAGACATTACACTAGTTAAtt                                      >  2:244806/6‑141 (MQ=255)
                                                                                                       tCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAAtt                                      <  1:102326/141‑1 (MQ=255)
                                                                                                            aTGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAGTGTTTTCATAGGCTTCTTCGACTGCTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTACTTTTCaa                                 >  2:568/1‑141 (MQ=255)
                                                                                                            aTGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCaa                                 >  2:898446/1‑141 (MQ=255)
                                                                                                              gAACCAAGTGCAACTTTCTTCACTTGGTTTTTTATTGTTTATAATTAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAAc                               <  1:332188/141‑1 (MQ=255)
                                                                                                               AACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACa                              >  1:32010‑M1/1‑141 (MQ=255)
                                                                                                                     GTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTGATAATCTTCTTCGACTACTTAATTATTTAAGATATTCGTGAAAAGAGACAGTACACTAATTAATTTTCAAACAATACaa                        >  1:609616‑M1/1‑141 (MQ=255)
                                                                                                                     GTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACaa                        <  2:249334‑M1/141‑1 (MQ=255)
                                                                                                                       GCAACTTTCTGCTCTTTGATTTTTATTTTTTATTATTAAAACTCACTTAATAATGTTTTAATACTCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACACTACACTCGTTAATTTTCAAAAAATTCaaaa                      <  2:306788‑M1/141‑1 (MQ=255)
                                                                                                                       GCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACaaaa                      <  1:766724‑M1/141‑1 (MQ=255)
                                                                                                                        CAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACaaaaa                     <  1:403308‑M1/141‑1 (MQ=255)
                                                                                                                        CAACTTTCTGCACTTAATTTTTTATGGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACaaaaa                     <  1:471406‑M1/141‑1 (MQ=255)
                                                                                                                           cTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCg                  <  1:894778/141‑1 (MQ=255)
                                                                                                                           aaagttgcacttggttTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCg                  >  1:301555‑M2/17‑141 (MQ=255)
                                                                                                                            tttCTGCACTTGGTTTTTTATAGTTTATAAATAAAACTCACTTAATAATGTTTTCATAACCTTCTTCGACTACTTAATCCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGt                 <  1:669160/141‑1 (MQ=255)
                                                                                                                                tgcacttggttTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTAc             <  2:147554‑M2/130‑1 (MQ=255)
                                                                                                                                tgcacttggttTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTAc             <  1:751905‑M2/130‑1 (MQ=255)
                                                                                                                                 gcacttggttTTTTATTGTTTATAAATAAAACTCACTCAATAATGTTTTCATAATCTTCTTCGACTACTTAATCCTTTAAGATATTCGTGAAACGAGACACTACACTAGTTAATCTCCAAACAATACAAAAAGCGCCTAcc            >  2:900826‑M2/11‑141 (MQ=255)
                                                                                                                                 gcacttggttTTTTATTGTTTATAAATAAAACTCAATTAATAATGTTTTCATAATCTTCTTCTACTACTTAATTCTTTAAGATATTCGTGAGAAGAGACATTACACTAGTTAATTTTCAAACATTACAAAACGCGCCAAcc            >  2:133106‑M2/11‑141 (MQ=255)
                                                                                                                                      tggttTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCCTa       <  1:54303‑M2/136‑1 (MQ=255)
                                                                                                                                        gttTTTTATTGTTTATAAATAAAACCCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCCTACa     <  2:590617‑M2/138‑1 (MQ=255)
                                                                                                                                           ttttATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCCTACatat  >  1:131777/1‑141 (MQ=255)
                                                                                                                                           |                                                                                                                                            
GTACTGAAGAGTTACCAGCAGACTTCCAACCACAAGTTGCAACAACTCAATTACGTGAAAAATATCAAAATTAAATATAGATGATCATTAGATAACTACTTGATCATTATGAACCAAGTGCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCCTACATAT  >  CP000730/1822606‑1822885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.