New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2736813 =39 (0.710)4 (0.080) 4/246 3.1 11.0% intergenic (+17/‑2697) panE2/USA300HOU_2595 2‑dehydropantoate 2‑reductase/APC family amino acid‑polyamine‑organocation transporter
?CP000730 2736870 = 29 (0.580)intergenic (+74/‑2640) panE2/USA300HOU_2595 2‑dehydropantoate 2‑reductase/APC family amino acid‑polyamine‑organocation transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCCGGTAAATAACGAGACGTTTGTTAAAGCGAAAATAGACTATAAAGATGTGGCAGAAGAAATTAGAGAAGCTGAATAGTCTAATATAATTAAAAGACCTTAGCGATATTAGGAACAGGTGGTTCTAAATGCATCGTTAAGGTCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/2736960‑2736813
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaggtcttttAATTATATTAGACTATTCAGCTTCTCTAATTTCTTCTGCCACATCTTTATAGTCTATTTTCGCTTTAACAAACGTCTCGTTATTTACCGGGAAATGTTGTTGGAATGTTTCAAAGTTTTGTATCTCAACGACAACGTC  >  CP000730/2736870‑2737007
                                                                                                                                                                                                                                                                                              
CCCGGTAAATAACGAGACGTTTGTTAAAGCGAAAATAGACTATAAAGATGTGGCAGAAGAAATTAGAGAAGCTGAATAGTCTAATATAATTAAAAGACCTTAGCGATATTAGGAACAGGTGGTTCTAAATGCATCGTTAAG                                                                                                                                                   <  1:267410/141‑1
    GTAAAGAACGAGACGTTTGTTAAAGCGAAAATAGACTATAAAGATGTGGCAGAAGAAATTAGAGAAGCTGAATAGTCTAATATAATTAAAAGACCTTAGCGGTATTAGGAACAGGTGGTTCTAAATGCATCGTTAAGGTCT                                                                                                                                               <  2:58098/141‑1
                                                 GTGGCAGAAGAAATTAGAGAAGCTGAATAGTCTAATATAATTAAAAGACCTTAGCGATATTAGGAACAGGTGGTTCTAAATGCATCGTTAAGGTCTTTT                                                                                                                                            >  1:109310/1‑99
                                                 GTGGCAGAAGAAATTAGAGAAGCTGAATAGTCTAATATAATTAAAAGACCTTAGCGATATTAGGAACAGGTGGTTCTAAATGCATCGTTAAGGTCTTTT                                                                                                                                            <  2:109310/99‑1
                                                                                       AATTAAAAGACCTTAGCGATATTAGGAACAGGTGGTTCTAAATGCATCGTTAAGGTCTTTTAATTATATTAGACTATTCAGCTTCTCTAATTTCTTCTGCCACATCTTTATAGTCTATTTTCGCTTTAACAAACGTCTCGT                                                            >  2:211054/1‑141
                                                                                        ATTAAAAGACCTTAGCGATATTAGGAACAGGTGGTTCTAAATGCATCGTTAAGGTCTTTTAATTATATTAGACTATTCAGCTTCTCTAATTTCTTCTGCCACATCTTTATAGTCTATTTTCGCTTTAACAAACGTCTCGTT                                                           >  1:47273/1‑141
                                                                                                  CTTAGCGATATTAGGAACAGGTGGTTCTAAATGCATCGTTAAGGTCTTTTAATTATATTAGACTATTCAGCTTCTCTAATTTCTTCTGCCACATCTTTATAGTCTATTTTCGCTTTAACAAACGTCTCGTTATTTACCGGG                                                 >  2:234737/1‑141
                                                                                                                                     TCGTTAAGGTCTTTTAATTATATTAGACTATTCAGCTTCTCTAATTTCTTCTGCCACATCTTTATAGTCTATTTTCGCTTTAACAAACGTCTCGTTATTTACCGGGAAATGTTGTTGGAATGTTTCAAAGTTTTGTATCTC              <  1:234737/141‑1
                                                                                                                                           AGGTCTTTTAATTATATTAGACTATTCAGCTTCTCTAATTTCTTCTGCCACATCTTTATAGTCTATTTTCGCTTTAACAAACGTCTCGTTATTTACCGGGAAATGTTGTTGGAATGTTTCAACGTTTTTTATCTCAACGAC        <  1:316898/141‑1
                                                                                                                                             GTCTTTTAATTATATTAGACTATTCAGCTTCTCTAATTTCTTCTGCCACATCTTTATAGTCTATTTTCGCTTTAACAAACGTCTCGTTATTTACCGGGAAATGTTGTTGGAATGTTTCAAAGTTTTGTATCTCAACGACAA      >  2:206502/1‑141
                                                                                                                                                 TTTAATTATATTAGACTATTCAGCTTCTCTAATTTCTTCTGCCACGTCTTTATAGTCTATTTTCGCTTTAACAAACGTCTCGTTATTTACCGGGAAATGTTGTTGGAATGTTTCAAAGTTTTGTATCTCAACGACAACGTC  <  2:216993/141‑1
                                                                                                                                                 TTTAATTATATTAGACTATTCAGCTTCTCTAATTTCTTCTGCCACATCTTTATAGTCTATTTTCGCTTTAACAAACGTCTCGTTATTTACCGGGAAATGTTGTTGGAATGTTTCAAAGTTTTGTATCTCAACGACAACGTC  <  1:277507/141‑1
                                                                                                                                                                                                                                                                                              
CCCGGTAAATAACGAGACGTTTGTTAAAGCGAAAATAGACTATAAAGATGTGGCAGAAGAAATTAGAGAAGCTGAATAGTCTAATATAATTAAAAGACCTTAGCGATATTAGGAACAGGTGGTTCTAAATGCATCGTTAAGGTCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/2736960‑2736813
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaggtcttttAATTATATTAGACTATTCAGCTTCTCTAATTTCTTCTGCCACATCTTTATAGTCTATTTTCGCTTTAACAAACGTCTCGTTATTTACCGGGAAATGTTGTTGGAATGTTTCAAAGTTTTGTATCTCAACGACAACGTC  >  CP000730/2736870‑2737007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.