New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2529098 =	16 (0.540)	3 (0.110)	3/276	1.3	18.9%	coding (840/1551 nt)	adcA	ABC superfamily ATP binding cassette transporter, binding protein
	?	CP000730	2529151 =	11 (0.400)					coding (787/1551 nt)	adcA	ABC superfamily ATP binding cassette transporter, binding protein
Rejected: Frequency below/above cutoff threshold.

GTTATGGTTTTGTTCAAAAAGGTATTCAAAACATGAATGCTGAAGATCCATCACAAAAAGAATTAACTAAAATTGTTAAAGAAATTAGAGATAGCAATGCTAAATATATTCTTTACGAAGATAATGTTGCGAATAAAGTGACTGAAACAATTCGTAAAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/2529258‑2529098 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgtaaagaaTATATTTAGCATTGCTATCTCTAATTTCTTTAACAATTTTAGTTAATTCTTTTTGTGATGGATCTTCAGCATTCATGTTTTGAATACCTTTTTGAACAAAACCATAACAATCAGCTAAGTATCCAATTGATTCATGTGAAATGAATACTG  >  CP000730/2529151‑2529300                                                                                                                                                                                                                                                                                                                         GTTATGGTTTTGTTCAAAAAGGTATTCAAAACATGAATGCTGAAGATCCATCACAAAAAGAATTAACTAAAATTGTTAAAGAAATTAGAGATAGCAATGCTAAATATATTCTTTACGAAGATAATGTTGCGAATAAAGTGACTGAAACAAT                                                                                                                                                                  <  2:454684/151‑1   TATGGTTTTGTTCAAAAAGGTATTCAAAACATGAATGCTGAAGATCCATCACAAAAAGAATTAACTAAAATTGTTAAAGAAATTAGAGATAGCAATGCTAAATATATTCTTTACGAAGATAATGTTGCGAATAAAGTGACTGAAACAATTC                                                                                                                                                                <  1:341730/151‑1                                                    CACAAAAAGAATTAACTAAAATTGTTAAAGAAATTAGAGATAGCAATGCTAAATATATTCTTTACGAAGATAATGTTGCGAATAAAGTGACTGAAACAATTCGTA                                                                                                                                                             <  1:210611/105‑1                                                    CACAAAAAGAATTAACTAAAATTGTTAAAGAAATTAGAGATAGCAATGCTAAATATATTCTTTACGAAGATAATGTTGCGAATAAAGTGACTGAAACAATTCGTA                                                                                                                                                             >  2:210611/1‑105                                                                                                 ATGCTAAATATATTCTTTACGAAGATAATGTTGCGAATAAAGTGACTGAAACAATTCGTAAAGAATATATTTAGCATTGCTATCTCTAATTTCTTTAACAATTTTAGTTAATTCTTTTTGTGATGGATCTTCAGCATTCATGTTTTGAATA                                                                  >  2:17244/1‑151                                                                                                                   ACGAAGATAATGTTGCGAATAAAGTGACTGAAACAATTCGTAAAGAATATATTTAGCATTGCTATCTCTAATTTCTTTAACAATTTTAGTTAATTCTTTTTGTGATGGATCTTCAGCATTCATGTTTTGAATACCTTTTTGAACAAAACCA                                                >  1:5646/1‑151                                                                                                                                          GTGACTGAAACAATTCGTAAAGAATATATTTAGCATTGCTATCTCTAATTTCTTTAACAATTTTAGTTAATTCTTTTTGTGATGGATCTTCAGCATTCATGTTTTGAATACCTTTTTGAACAAAACCATAACAATCAGCTAAGTATCCAAT                         <  1:17244/151‑1                                                                                                                                                           TAAAGAATATATTTAGCATTGCTATCTCTAATTTCTTTAACAATTTTAGTTAATTCTTTTTGTGATGGATCTTCAGCATTCATGTTTTGAATACCTTTTTGAACAAAACCATAACAATCAGCTAAGTATCCAATTGATTCATGTGAAATGA        >  2:292223/1‑151                                                                                                                                                            AAAGAATATATTTAGCATTGCTATCTCTAATTTCTTTAACAATTTTAGTTAATTCTTTTTTTTTTGTATTTTCAGCATTCATGTTTTGAACACCTTTTTGCACAAAACCATAACAATCAGCTAAGTATCCAATTGATCCATGTGAAATAAA       >  2:1303/1‑151                                                                                                                                                                AATATATTTAGCATTGCTATCTCTAATTTCTTTAACAATTTTAGTTAATTCTTTTTGTGATGGATCTTCAGCATTCATGTTTTGAATACCTTTTTGAACAAAACCATAACAATCAGCTAAGTATCCAATTGATTCATGTGAAATGAATACT   >  2:166686/1‑151                                                                                                                                                                 ATATATTTAGCATTGCTATCTCTAATTTCTTTAACAATTTTAGTTAATTCTTTTTGTGATGGATCTTCAGCATTCATGTTTTGAATACCTTTTTGAACAATTCCATAACAATCAGCTAAGTATCCAATTGATTCATGTGAAATGAATACTG  >  2:206893/1‑151                                                                                                                                                                                                                                                                                                                         GTTATGGTTTTGTTCAAAAAGGTATTCAAAACATGAATGCTGAAGATCCATCACAAAAAGAATTAACTAAAATTGTTAAAGAAATTAGAGATAGCAATGCTAAATATATTCTTTACGAAGATAATGTTGCGAATAAAGTGACTGAAACAATTCGTAAAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/2529258‑2529098 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgtaaagaaTATATTTAGCATTGCTATCTCTAATTTCTTTAACAATTTTAGTTAATTCTTTTTGTGATGGATCTTCAGCATTCATGTTTTGAATACCTTTTTGAACAAAACCATAACAATCAGCTAAGTATCCAATTGATTCATGTGAAATGAATACTG  >  CP000730/2529151‑2529300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.