New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2365752 =	53 (0.810)	4 (0.070)	4/240	NT	8.2%	coding (200/318 nt)	rplX	ribosomal protein L24
	?	CP000730	2365784 =	40 (0.660)					coding (168/318 nt)	rplX	ribosomal protein L24

GGTAAAGAAGGTAAAGTAATTGCTACTCTACCTAAAAAAGACCGTGTCGTTGTGGAAGGTGTTAACATTATGAAAAAACACCAAAAACCAACTCAATTAAATCCTGAAGGTGGAATCTTAGAAACAGAGGCAGCAATCCATGTTTCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/2365900‑2365752 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtttctaaGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAATTACTTTACCTTCTTTACCTTTGTCTTTACCTGCGATAACTT  >  CP000730/2365784‑2365923                                                                                                                                                                                                                                                                                                   gaTAAAGAAGGGAAAGTAATTGCTACTCTACCTAAAAAAAACCGTGATGTTGTGGAAGGTTTTAACATTATAAAAAAAAAAAAAAAACCAACTCAATTAAATCCTGAAGGTGGAATCTTAGAAACAGAGGCAGCAATCCAT                                                                                                                                                      <  2:479417/139‑1  GTAAAGAAGGTAAAGTAATTGCTACTCTACATAAAAAAGACCGTGTCGTTGTGGAAGGTGTTAACATTATGAAAAAACACCAAAAACCAACTCAATTAAATCCTGAAGGTGGAATCTTAGAAACAGAGGCAGCAATCCATG                                                                                                                                                     >  1:183845/1‑141     AAGAAGGTAAAGTAATTGCTACTCTACCTAAAAAAGACCGTGTCGTTGTGGAAGGTGTTAACATTATGAAAAAACACCAAAAACCAACTCAATTAAATCCTGAAGGTGGAATCTTAGAAACAGAGGCAGCAATCCATGTTT                                                                                                                                                  >  2:223285/1‑141                                                                                                   AAATCCTGAAGGTGGAATCTTAGAAACAGAGGCAGCAATCCATGTTTCTAAGATTCCACCTTCAGGATTT                                                                                                                           >  1:415806/1‑70                                                                                                   AAATCCTGAAGGTGGAATCTTAGAAACAGAGGCAGCAATCCATGTTTCTAAGATTCCACCTTCAGGATTT                                                                                                                           <  2:415806/70‑1                                                                                                            AGGTGGAATCTTAGAAACAGAGGCAGCAATCCATGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAAT                                           >  1:246603/1‑141                                                                                                                               GAGGCAGCAATCCATGNTTCTAAGATTCCNCCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAATTACTTTACCTTCTTTACCT                        >  1:732707/1‑141                                                                                                                                                TTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAATTACTTTACCTTCTTTACCTTTGTCTTTACCTGCGAT       <  1:3469/141‑1                                                                                                                                                  CTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAATTACTTTACCTTCTTTACCTTTGTCTTTACCTGCGATAA     >  1:22120/1‑141                                                                                                                                                   TAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAATTACTTTACCTTCTTTACCTTTGTCTTTACCTGCGATAAC    <  1:647480/141‑1                                                                                                                                                     AGATTCCATCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAATTACTTTACCTTCTTTGCCTTTGTCTTTACCTGCGATAACTT  <  2:785537/141‑1                                                                                                                                                                                                                                                                                                   GGTAAAGAAGGTAAAGTAATTGCTACTCTACCTAAAAAAGACCGTGTCGTTGTGGAAGGTGTTAACATTATGAAAAAACACCAAAAACCAACTCAATTAAATCCTGAAGGTGGAATCTTAGAAACAGAGGCAGCAATCCATGTTTCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/2365900‑2365752 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtttctaaGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAATTACTTTACCTTCTTTACCTTTGTCTTTACCTGCGATAACTT  >  CP000730/2365784‑2365923

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.