New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2365752 =53 (0.810)4 (0.070) 4/240 NT 8.2% coding (200/318 nt) rplX ribosomal protein L24
?CP000730 2365784 = 40 (0.660)coding (168/318 nt) rplX ribosomal protein L24

GGATCCTCCTTTCAACTTGTTATTAATTATTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAATTACTTTAC  >  CP000730/2365612‑2365890
                                                                                                                                            |                                                                                                                                          
aagttatcgcaggtaaagacaaaggcaaagaaggtaaagtaattgctactctacctaaaaaagaccgtgtcgttgtggaaggtgttaacattatgaaaaaacaccaaaaaccaactcaattaaatcctgaagatggaatct                                                                                                                                            <  2:785537‑M1/1‑1 (MQ=255)
  gttatcgcaggtaaagacaaaggtaaagaaggtaaagtaattgctactctacctaaaaaagaccgtgtcgttgtggaaggtgttaacattatgaaaaaacaccaaaaaccaactcaattaaatcctgaaggtggaatcTTa                                                                                                                                          <  1:647480‑M1/3‑1 (MQ=255)
   ttatcgcaggtaaagacaaaggtaaagaaggtaaagtaattgctactctacctaaaaaagaccgtgtcgttgtggaaggtgttaacattatgaaaaaacaccaaaaaccaactcaattaaatcctgaaggtggaatcTTAg                                                                                                                                         >  1:22120‑M1/138‑141 (MQ=255)
    cctcctTTCAACTTGTTATTAATTATTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGa                                                                                                                                        >  2:407272/1‑141 (MQ=255)
     ctcctTTCAACTTGTTATTAATTATTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGaa                                                                                                                                       >  2:400420/1‑141 (MQ=255)
     ctcctTTCAACTTGTTATTAATTATTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGaa                                                                                                                                       <  2:435350/141‑1 (MQ=255)
     atcgcaggtaaagacaaaggtaaagaaggtaaagtaattgctactctacctaaaaaagaccgtgtcgttgtggaaggtgttaacattatgaaaaaacaccaaaaaccaactcaattaaatcctgaaggtggaatcTTAGaa                                                                                                                                       <  1:3469‑M1/6‑1 (MQ=255)
          ttCAACTTGTTATTAATTATTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATg                                                                                                                                  >  1:191349/1‑141 (MQ=255)
            cAACTTGTTATTAATTATTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGa                                                                                                                                <  1:210715/141‑1 (MQ=255)
              aCTTGTTATTAATTATTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGAtt                                                                                                                              <  2:103095/141‑1 (MQ=255)
               cTTGTTATTAATTATTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATtg                                                                                                                             <  1:495364/141‑1 (MQ=255)
                  gTTATTAATTATTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATtgctg                                                                                                                          >  1:653522/1‑141 (MQ=255)
                    tattaATTATTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGcc                                                                                                                        <  2:38406/141‑1 (MQ=255)
                    tattaATTATTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGcc                                                                                                                        >  2:698054/1‑141 (MQ=255)
                     attaattaTTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCct                                                                                                                       <  1:503606/141‑1 (MQ=255)
                      aggtaaagaaggtaaagtaattgctactctacctaaaaaagaccgtgtcgttgtggaaggtgttaacattatgaaaaaacaccaaaaaccaactcaattaaatcctgaaggnggaatcTTAGAANCATGGATTGCTGCctc                                                                                                                      >  1:732707‑M1/119‑141 (MQ=255)
                        aattaTTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAGCCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTg                                                                                                                    <  1:154834/141‑1 (MQ=255)
                         attattAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGt                                                                                                                   >  2:336039/1‑141 (MQ=255)
                             ttaGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCt                                                                                                               <  1:57882/141‑1 (MQ=255)
                             ttaGATGTAATTGCGTCGCCAGATTTTTTAGCGATACGAGCTGTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCt                                                                                                               <  2:397772/141‑1 (MQ=255)
                               aGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTaa                                                                                                             >  1:327994/1‑141 (MQ=255)
                                gATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAg                                                                                                            >  1:720335/1‑141 (MQ=255)
                                 aTTTAATTTCTTCGCCAGATTTTTTTTTTTTTTTTTTTTTTTTACCATCAACAAATTTTTAATTTACTTGGTTTGGTTCGTTTGTTTTCGGGTCCAATTATTGTACATTAGATATATTGTTTTCTGCCTtttttttttatt                                                                                                           >  2:705574/1‑135 (MQ=255)
                                  tttAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGAt                                                                                                          <  2:155560/141‑1 (MQ=255)
                                   ttAATTTCTTCGCCAGATTTTTTCGCTATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGATTTTTTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATCGATTCCTGCCTCTGTTTCTAATAtt                                                                                                         <  2:360056/141‑1 (MQ=255)
                                   ttAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGGTGGTTAGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGAtt                                                                                                         >  1:286079/1‑141 (MQ=255)
                                         tcttcGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCt                                                                                                   >  1:725022/1‑141 (MQ=255)
                                         attgctactctacctaaaaaagaccgtgtcgttgtggaaggtgttaacattatgaaaaaacaccaaaaaccaactcaattaaatcctgaaggtggaatcTTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCt                                                                                                   >  1:246603‑M1/100‑141 (MQ=255)
                                          cttcGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCtt                                                                                                  >  2:497244/1‑141 (MQ=255)
                                             cGCCAGATTTTTTAGCGATACTAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATTGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAg                                                                                               <  1:521906/141‑1 (MQ=255)
                                             cGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAg                                                                                               <  2:302969/141‑1 (MQ=255)
                                              gCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAgg                                                                                              >  1:94809/1‑141 (MQ=255)
                                                     tttttAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAAt                                                                                       <  2:344820/141‑1 (MQ=255)
                                                       tttAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTg                                                                                     <  1:774181/141‑1 (MQ=255)
                                                          aGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGt                                                                                  <  2:242677/141‑1 (MQ=255)
                                                          aGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGt                                                                                  >  1:292113/1‑141 (MQ=255)
                                                             gATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATTGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTgg                                                                               >  2:699822/1‑141 (MQ=255)
                                                                  gAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGCTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGttttt                                                                          <  2:751570/141‑1 (MQ=255)
                                                                     cTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGgt                                                                       >  2:479553/1‑141 (MQ=255)
                                                                     cTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGgt                                                                       >  2:6821/1‑141 (MQ=255)
                                                                           tACCATCAACAAATTTGTAACCTACACGANTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGGGtgttt                                                                 >  1:504696/1‑141 (MQ=255)
                                                                               aTCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCAt                                                             <  2:187030/141‑1 (MQ=255)
                                                                                tCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATa                                                            >  1:719873/1‑141 (MQ=255)
                                                                                tCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATa                                                            >  1:192480/1‑141 (MQ=255)
                                                                                     aaaTTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGtt                                                       <  1:545550/141‑1 (MQ=255)
                                                                                     aaaTTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGtt                                                       <  1:428116/141‑1 (MQ=255)
                                                                                     aaaTTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGtt                                                       <  2:42719/141‑1 (MQ=255)
                                                                                        tttGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAac                                                    <  2:493964/141‑1 (MQ=255)
                                                                                         tggTAATCGACTCGAGTAGGTTCGTTTGTTTTGGGGTCCGATAATTGTACATGAGAATCATGGATTGGTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTTATTGTGTTGGTTTTTGGTGTTTTTTCATTATGTTagcc                                                   <  2:252172/139‑4 (MQ=255)
                                                                                          tGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAacac                                                  <  2:286226/141‑1 (MQ=255)
                                                                                           gTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACAcc                                                 <  1:538220/141‑1 (MQ=255)
                                                                                                cTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCca                                            >  2:723506/1‑141 (MQ=255)
                                                                                                  acacGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCACGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCcaca                                          <  1:400420/141‑1 (MQ=255)
                                                                                                       aGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGac                                     <  1:679594/141‑1 (MQ=255)
                                                                                                       aGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGac                                     <  1:52081/141‑1 (MQ=255)
                                                                                                          tGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACg                                  <  1:637662/141‑1 (MQ=255)
                                                                                                                     ttttAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAg                       >  1:549701/1‑141 (MQ=255)
                                                                                                                         aaatcctgaaggtggaatcTTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGAttt                                                                                          <  2:415806‑M1/51‑1 (MQ=255)
                                                                                                                         aaatcctgaaggtggaatcTTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGAttt                                                                                          >  1:415806‑M1/20‑70 (MQ=255)
                                                                                                                         aGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTag                   >  2:240788/1‑141 (MQ=255)
                                                                                                                              ccAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAg              >  2:347637/1‑141 (MQ=255)
                                                                                                                                  taatTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAAt          <  1:394582/141‑1 (MQ=255)
                                                                                                                                         aCATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAATTActtta   >  1:677489/1‑141 (MQ=255)
                                                                                                                                          cATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAATTActttac  <  1:597340/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                          
GGATCCTCCTTTCAACTTGTTATTAATTATTAGATTTAATTTCTTCGCCAGATTTTTTAGCGATACGAACTTTTTTACCATCAACAAATTTGTAACCTACACGAGTTGGTTCGTTTGTTTTAGGGTCCAATAATTGTACATTAGAAACATGGATTGCTGCCTCTGTTTCTAAGATTCCACCTTCAGGATTTAATTGAGTTGGTTTTTGGTGTTTTTTCATAATGTTAACACCTTCCACAACGACACGGTCTTTTTTAGGTAGAGTAGCAATTACTTTAC  >  CP000730/2365612‑2365890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.