New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2186610 =	71 (1.090)	3 (0.050)	3/240	NT	4.9%	coding (5/480 nt)	rsbW	anti‑sigma B factor
	?	CP000730	2186648 =	50 (0.820)					coding (295/327 nt)	rsbV	anti‑sigma B factor antagonist
Rejected: Frequency below/above cutoff threshold.

CACTAACTGCAATCTTGGCATCTTCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTT  >  CP000730/2186470‑2186742                                                                                                                                             |                                                                                                                                     cACTAACTGCAATCTTGGCATCTTCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGAtt                                                                                                                                      >  2:12339/1‑141 (MQ=255)   gttatatggattcgacaggtttaggtttattcgtaggtacattaaaagcattaaaccaaaatgataaagaactatacattttaggtgtgtcagatcgtatcggtagactatttgaaattactggtcttaaggatttaaTGc                                                                                                                                    <  2:300122‑M1/3‑1 (MQ=255)    ttatatggattcgacaggtttaggtttattcgtaggtacattaaaagcattaaaccaaaatgataaagaactatacattttaggtgtgtcagatcgtatcggtagactatttgaaattactggtcttaaggatttaaTgcc                                                                                                                                   <  1:135681‑M1/4‑2 (MQ=255)     tatatggattcgacaggtttaggtttattcgtaggtacattaaaagcattaaaccaaaatgataaagaactatacattttaggtgtgtcagatcgtatcggtagactatttgaaattactggtcttaaggatttaaTGCAt                                                                                                                                  >  2:562840‑M1/137‑141 (MQ=255)     tatatggattcgacaggtttaggtttattcgtaggtacattaaaagcattaaaccaaaatgataaagaactatacattttaggtgtgtcagatcgtatcggtagactatttgaaattactggtcttaaggatttaaTGCAt                                                                                                                                  >  2:340312‑M1/137‑141 (MQ=255)      atatggattcgacaggtttaggtttattcgtaggtacattaaaagcattaaaccaaaatgataaagaactatacattttaggtgtgtcagatcgtatcggtagactatttgaaattactggtcttaaggatttgaTGCATg                                                                                                                                 >  1:621662‑M1/136‑141 (MQ=255)      atatggattcgacaggtttaggtttattcgtaggtacattaaaagcattaaaccaaaatgataaagaactatacattttaggtgtgtcagatcgtatcggtagactatttgaaattactggtcttaaggatttaaTGCATg                                                                                                                                 >  2:237830‑M1/136‑141 (MQ=255)       cTGCAATCTTGGCATCTTCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGt                                                                                                                                >  1:307251/1‑141 (MQ=255)            aTCTTGGCATCTTCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTc                                                                                                                           >  2:202769/1‑141 (MQ=255)            aTCTTGGCATCTTCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTc                                                                                                                           >  2:612528/1‑141 (MQ=255)            aTCTTGGCATCTTCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATNTCGANAAAATCTTCTNTAGATTGCATGTTATTc                                                                                                                           <  1:507126/141‑1 (MQ=255)                tGGCATCTTCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGAcc                                                                                                                       <  1:243053/141‑1 (MQ=255)                 ggCATCTTCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCt                                                                                                                      >  1:386528/1‑141 (MQ=255)                 ggCATCTTCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCt                                                                                                                      >  1:334220/1‑141 (MQ=255)                  gCATCTTCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTc                                                                                                                     >  1:521367/1‑141 (MQ=255)                  gCATCTTCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTc                                                                                                                     >  2:238163/1‑141 (MQ=255)                       ttCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTc                                                                                                                <  1:106557/141‑1 (MQ=255)                        tCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTGcc                                                                                                               >  1:38413/1‑141 (MQ=255)                         cAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCt                                                                                                              >  2:328223/1‑141 (MQ=255)                           atatCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTc                                                                                                            >  2:481601/1‑141 (MQ=255)                            tatCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCa                                                                                                           <  2:407750/141‑1 (MQ=255)                              tcatcaTATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAACCGAATTCAACTTCCCTTCTCTGCCGAAGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCAtt                                                                                                         <  1:548701/141‑1 (MQ=255)                              taaccttttaatttaCCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCAtt                                                                                                         <  1:733572/127‑1 (MQ=255)                               catcatATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTa                                                                                                        <  1:407612/141‑1 (MQ=255)                               catcatATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTa                                                                                                        >  1:647349/1‑141 (MQ=255)                                atcatATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTaa                                                                                                       >  1:217374/1‑141 (MQ=255)                                    taggtacattaaaagcattaaaccaaaatgataaagaactatacattttaggtgtgtcagatcgtatcggtagactatttgaaattactggtcttaaggatttaaTGCATGTTATTCGACCTCCGTTCCTTCATTAACATg                                                                                                   >  1:156529‑M1/106‑141 (MQ=255)                                     atGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGc                                                                                                  <  1:70624/141‑1 (MQ=255)                                      tGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCGTGTTATTCGACCTCCGTTCCTTCATTAACATGCa                                                                                                 >  1:741350/1‑141 (MQ=255)                                        tacattaaaagcattaaaccaaaatgataaagaactatacattttaggtgtgtcagatcgtatcggtagactatttgaaattactggtcttaaggatttaaTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCAtt                                                                                               <  2:496093‑M1/40‑1 (MQ=255)                                         aGCACCAGCTCTCGAAACAACGCCAGAAAGTGTTAAACGAATTACACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTa                                                                                              <  2:465919/141‑1 (MQ=255)                                         aGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTa                                                                                              <  1:398060/141‑1 (MQ=255)                                          gCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTaa                                                                                             >  1:584325/1‑141 (MQ=255)                                          acACCAGCACTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTaa                                                                                             <  2:165922/140‑1 (MQ=255)                                           cACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCGCGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTaaa                                                                                            <  2:679508/141‑1 (MQ=255)                                              cAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTAAGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATct                                                                                         <  1:743996/141‑2 (MQ=255)                                                 ctctCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTa                                                                                      >  1:221363/1‑141 (MQ=255)                                                  tctcGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCACGTTATTCTACCTCCGTTCCTTCATTTACATGCATTAAATCCTTaa                                                                                     >  2:601358/1‑141 (MQ=255)                                                   ctcGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCNANCTCCGTNCCTTCATTAACATGCATTAAATCCTTAAg                                                                                    <  1:114067/141‑1 (MQ=255)                                                     cGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGAc                                                                                  >  2:639181/1‑141 (MQ=255)                                                         accaaaatgataaagaactatacattttaggtgtgtcagatcgtatcggtagactatttgaaattactggtcttaaggatttaaTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGt                                                                              >  1:496093‑M1/85‑141 (MQ=255)                                                             cGCCAGAAAGTGTTAAACGAATTAGACTTACTTACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTACAATCACATGCATTAAATCCTAAAGACCAGTAAtt                                                                          <  2:469457/141‑1 (MQ=255)                                                               ccAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTc                                                                        >  1:118434/1‑141 (MQ=255)                                                                cAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCa                                                                       <  2:628325/141‑1 (MQ=255)                                                                 aGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCaa                                                                      <  1:601829/141‑1 (MQ=255)                                                                 aGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCaa                                                                      <  2:377696/141‑1 (MQ=255)                                                                  gAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCaaa                                                                     >  2:448384/1‑141 (MQ=255)                                                                      gtgtTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGt                                                                 <  2:521367/141‑1 (MQ=255)                                                                       tgtTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTc                                                                >  1:629416/1‑141 (MQ=255)                                                                         ttAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTa                                                              >  2:201770/1‑141 (MQ=255)                                                                            aaCGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCg                                                           <  2:457305/141‑1 (MQ=255)                                                                            aaCGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCg                                                           <  2:648857/141‑1 (MQ=255)                                                                                aaTTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATAc                                                       <  2:569805/141‑1 (MQ=255)                                                                                     aaCTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTACTTTAAAATAGTCTACCGATACGATCt                                                  >  1:165783/1‑141 (MQ=255)                                                                                     aaCTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCt                                                  >  2:366724/1‑141 (MQ=255)                                                                                       cTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGa                                                <  2:573964/141‑1 (MQ=255)                                                                                             tACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACAcc                                          <  2:703329/141‑1 (MQ=255)                                                                                              cctctGCCGCTGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCt                                         <  1:448384/140‑1 (MQ=255)                                                                                              aCTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGTCCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCt                                         >  2:517454/1‑141 (MQ=255)                                                                                               ctctGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTa                                        <  1:116689/141‑1 (MQ=255)                                                                                               ctctGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTa                                        <  1:342205/141‑1 (MQ=255)                                                                                               ctctGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTa                                        >  1:708869/1‑141 (MQ=255)                                                                                                 ctGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTaaa                                      >  1:412004/1‑141 (MQ=255)                                                                                                 ctGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTaaa                                      >  1:699012/1‑141 (MQ=255)                                                                                                 ctGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTaaa                                      >  1:703005/1‑141 (MQ=255)                                                                                                    ccGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATg                                   <  2:766423/141‑1 (MQ=255)                                                                                                    ccGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATg                                   <  1:306451/141‑1 (MQ=255)                                                                                                        tGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGtata                               >  2:505359/1‑141 (MQ=255)                                                                                                         gCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAg                              >  1:188132/1‑141 (MQ=255)                                                                                                             gCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCt                          <  2:221363/141‑1 (MQ=255)                                                                                                              cACGCGCATTTCGATAAAATCTTCTTTAGATCGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCtt                         >  2:49617/1‑141 (MQ=255)                                                                                                               aCGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCttt                        <  2:250284/141‑1 (MQ=255)                                                                                                                cgcgCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTa                       <  2:559189/141‑1 (MQ=255)                                                                                                                    cATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCAt                   <  2:745523/141‑1 (MQ=255)                                                                                                                             aaaaTCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTa          <  2:726857/141‑1 (MQ=255)                                                                                                                                  cttcttTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCt     <  2:561663/141‑1 (MQ=255)                                                                                                                                   ttcttTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCtt    <  2:303627/141‑1 (MQ=255)                                                                                                                                    tcttTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCttt   <  2:307251/141‑1 (MQ=255)                                                                                                                                     cttTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCtttt  <  2:622198/141‑1 (MQ=255)                                                                                                                                      tttAGATTGCATGTTATTCGACCTCCGTTCCTTCAtt                                                                                                         >  2:604365/1‑37 (MQ=255)                                                                                                                                      tttAGATTGCATGTTATTCGACCTCCGTTCCTTCAtt                                                                                                         <  1:604365/37‑1 (MQ=255)                                                                                                                                             |                                                                                                                                     CACTAACTGCAATCTTGGCATCTTCAATATCATCATATGTAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTT  >  CP000730/2186470‑2186742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.