New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2186610 =71 (1.090)3 (0.050) 3/240 NT 4.9% coding (5/480 nt) rsbW anti‑sigma B factor
?CP000730 2186648 = 50 (0.820)coding (295/327 nt) rsbV anti‑sigma B factor antagonist
Rejected: Frequency below/above cutoff threshold.

TAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATAAACCTAAACCTGTCGAATCCATATAAC  >  CP000730/2186509‑2186785
                                                                                                                                           |                                                                                                                                         
tacattaaaagcattaaaccaaaatgataaagaactatacattttaggtgtgtcagatcgtatcggtagactatttgaaattactggtcttaaggatttaaTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCAtt                                                                                                                                          <  2:496093‑M1/40‑1 (MQ=255)
 aGCACCAGCTCTCGAAACAACGCCAGAAAGTGTTAAACGAATTACACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTa                                                                                                                                         <  2:465919/141‑1 (MQ=255)
 aGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTa                                                                                                                                         <  1:398060/141‑1 (MQ=255)
  gCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTaa                                                                                                                                        >  1:584325/1‑141 (MQ=255)
  acACCAGCACTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTaa                                                                                                                                        <  2:165922/140‑1 (MQ=255)
   cACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCGCGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTaaa                                                                                                                                       <  2:679508/141‑1 (MQ=255)
      cAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTAAGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATct                                                                                                                                    <  1:743996/141‑2 (MQ=255)
         ctctCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTa                                                                                                                                 >  1:221363/1‑141 (MQ=255)
          tctcGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCACGTTATTCTACCTCCGTTCCTTCATTTACATGCATTAAATCCTTaa                                                                                                                                >  2:601358/1‑141 (MQ=255)
           ctcGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCNANCTCCGTNCCTTCATTAACATGCATTAAATCCTTAAg                                                                                                                               <  1:114067/141‑1 (MQ=255)
             cGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGAc                                                                                                                             >  2:639181/1‑141 (MQ=255)
                 accaaaatgataaagaactatacattttaggtgtgtcagatcgtatcggtagactatttgaaattactggtcttaaggatttaaTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGt                                                                                                                         >  1:496093‑M1/85‑141 (MQ=255)
                     cGCCAGAAAGTGTTAAACGAATTAGACTTACTTACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTACAATCACATGCATTAAATCCTAAAGACCAGTAAtt                                                                                                                     <  2:469457/141‑1 (MQ=255)
                       ccAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTc                                                                                                                   >  1:118434/1‑141 (MQ=255)
                        cAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCa                                                                                                                  <  2:628325/141‑1 (MQ=255)
                         aGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCaa                                                                                                                 <  1:601829/141‑1 (MQ=255)
                         aGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCaa                                                                                                                 <  2:377696/141‑1 (MQ=255)
                          gAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCaaa                                                                                                                >  2:448384/1‑141 (MQ=255)
                              gtgtTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGt                                                                                                            <  2:521367/141‑1 (MQ=255)
                               tgtTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTc                                                                                                           >  1:629416/1‑141 (MQ=255)
                                 ttAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTa                                                                                                         >  2:201770/1‑141 (MQ=255)
                                    aaCGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCg                                                                                                      <  2:457305/141‑1 (MQ=255)
                                    aaCGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCg                                                                                                      <  2:648857/141‑1 (MQ=255)
                                        aaTTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATAc                                                                                                  <  2:569805/141‑1 (MQ=255)
                                             aaCTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTACTTTAAAATAGTCTACCGATACGATCt                                                                                             >  1:165783/1‑141 (MQ=255)
                                             aaCTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCt                                                                                             >  2:366724/1‑141 (MQ=255)
                                               cTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGa                                                                                           <  2:573964/141‑1 (MQ=255)
                                                     tACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACAcc                                                                                     <  2:703329/141‑1 (MQ=255)
                                                      cctctGCCGCTGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCt                                                                                    <  1:448384/140‑1 (MQ=255)
                                                      aCTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGTCCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCt                                                                                    >  2:517454/1‑141 (MQ=255)
                                                       ctctGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTa                                                                                   >  1:708869/1‑141 (MQ=255)
                                                       ctctGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTa                                                                                   <  1:116689/141‑1 (MQ=255)
                                                       ctctGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTa                                                                                   <  1:342205/141‑1 (MQ=255)
                                                         ctGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTaaa                                                                                 >  1:703005/1‑141 (MQ=255)
                                                         ctGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTaaa                                                                                 >  1:412004/1‑141 (MQ=255)
                                                         ctGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTaaa                                                                                 >  1:699012/1‑141 (MQ=255)
                                                            ccGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATg                                                                              <  2:766423/141‑1 (MQ=255)
                                                            ccGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATg                                                                              <  1:306451/141‑1 (MQ=255)
                                                                tGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGtata                                                                          >  2:505359/1‑141 (MQ=255)
                                                                 gCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAg                                                                         >  1:188132/1‑141 (MQ=255)
                                                                     gCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCt                                                                     <  2:221363/141‑1 (MQ=255)
                                                                      cACGCGCATTTCGATAAAATCTTCTTTAGATCGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCtt                                                                    >  2:49617/1‑141 (MQ=255)
                                                                       aCGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCttt                                                                   <  2:250284/141‑1 (MQ=255)
                                                                        cgcgCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTa                                                                  <  2:559189/141‑1 (MQ=255)
                                                                            cATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCAt                                                              <  2:745523/141‑1 (MQ=255)
                                                                                  actggtcttaaggatttaatgcatgttaatgaaggaacggaggtcgaataacatgcaTTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGt                                                        >  1:496093‑M2/58‑141 (MQ=255)
                                                                                     aaaaTCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTa                                                     <  2:726857/141‑1 (MQ=255)
                                                                                          cttcttTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCt                                                <  2:561663/141‑1 (MQ=255)
                                                                                           ttcttTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCtt                                               <  2:303627/141‑1 (MQ=255)
                                                                                            tcttTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCttt                                              <  2:307251/141‑1 (MQ=255)
                                                                                             cttTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCtttt                                             <  2:622198/141‑1 (MQ=255)
                                                                                                   aatgcatgttaatgaaggaacggaggtcgaataacatgcaTTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTa                                       <  2:496093‑M2/101‑1 (MQ=255)
                                                                                                       catgttaatgaaggaacggaggtcgaataacatgcaTTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTa                                   >  1:156529‑M2/37‑141 (MQ=255)
                                                                                                        ATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTAc                                  <  1:613878‑M1/141‑1 (MQ=255)
                                                                                                          GTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTAcgc                                >  2:632892‑M1/1‑140 (MQ=255)
                                                                                                          GTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTAcgc                                >  2:632869‑M1/1‑140 (MQ=255)
                                                                                                           TTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGaa                               >  1:328223‑M1/1‑141 (MQ=255)
                                                                                                             ATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATa                             >  2:647349‑M1/1‑141 (MQ=255)
                                                                                                             ATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGCCTACCGATACGATCTGACACACCTAAAATGTATAGTACTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATa                             >  1:355722‑M1/1‑141 (MQ=255)
                                                                                                               tCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAAtaaa                           >  2:316296/1‑141 (MQ=255)
                                                                                                                cGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAAtaaac                          >  2:276733/1‑141 (MQ=255)
                                                                                                                 gACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAAtaaacc                         >  1:119382/1‑141 (MQ=255)
                                                                                                                      ccGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAAtaaacctaaac                    >  1:245042/1‑141 (MQ=255)
                                                                                                                        gTTCCTTCATTCACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATaaacctaaacct                  <  1:85408/141‑1 (MQ=255)
                                                                                                                        gTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATaaacctaaacct                  <  1:612528/141‑1 (MQ=255)
                                                                                                                           ccTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATAAACCTAAACCTGTc               <  1:202769/141‑1 (MQ=255)
                                                                                                                                     catgcaTTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATAAACCTAAACCTGTCGAATCCatat     >  2:237830‑M2/7‑141 (MQ=255)
                                                                                                                                     catgcaTCAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATAAACCTAAACCTGTCGAATCCatat     >  1:621662‑M2/7‑141 (MQ=255)
                                                                                                                                      atgcaTTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATAAACCTAAACCTGTCGAATCCAtata    >  2:562840‑M2/6‑141 (MQ=255)
                                                                                                                                      atgcaTTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATAAACCTAAACCTGTCGAATCCAtata    >  2:340312‑M2/6‑141 (MQ=255)
                                                                                                                                       ggcaTTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATAAACCTAAACCTGTCGAATCCATATaa   <  1:135681‑M2/137‑1 (MQ=255)
                                                                                                                                        gcaTTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATAAACCTAAACCTGTCGAATCCATATAAc  <  2:300122‑M2/138‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                         
TAGCACCAGCTCTCGAAAAAACGCCAGAAAGTGTTAAACGAATTAAACTTACATACTCTGCCGATGCTGGCACGCGCATTTCGATAAAATCTTCTTTAGATTGCATGTTATTCGACCTCCGTTCCTTCATTAACATGCATTAAATCCTTAAGACCAGTAATTTCAAATAGTCTACCGATACGATCTGACACACCTAAAATGTATAGTTCTTTATCATTTTGGTTTAATGCTTTTAATGTACCTACGAATAAACCTAAACCTGTCGAATCCATATAAC  >  CP000730/2186509‑2186785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.