BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2609406	77 (1.180)	5 (0.080)	4/234	NT	6.2%	intergenic (‑236/‑199)	USA300HOU_2471/USA300HOU_2472	hypothetical protein/hypothetical protein
*	?	CP000730	= 2609438	81 (1.370)	5 (0.080)	4/234	NT	6.2%	intergenic (‑268/‑167)	USA300HOU_2471/USA300HOU_2472	hypothetical protein/hypothetical protein

Only 100 of 112 total aligned reads displayed.

ATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATAT  >  CP000730/2609272‑2609546

ataaaGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGAt                                                                                                                                        >  1:569872/1‑141 (MQ=255)

 taaaGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATa                                                                                                                                       >  1:771725/1‑141 (MQ=255)

  aaaGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAc                                                                                                                                      <  1:657382/141‑1 (MQ=255)

    agtgATTTGTGGTGTATTTTACAGATGTATCACTATTTGGGAAAAGTAAGAAATAGTTAATTATATAAAAGGTTAATAAGTCAGAAAAGATGGTTAAGTGTAGGTGGGCTTTAGACATTAAAAGCTTCTTACATCATACgg                                                                                                                                    <  2:74283/138‑1 (MQ=255)

     gggATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGa                                                                                                                                   <  2:283550/141‑1 (MQ=255)

           tgtgATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGa                                                                                                                             >  2:147768/1‑141 (MQ=255)

            gtgATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAg                                                                                                                            >  2:347725/1‑141 (MQ=255)

              gATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGt                                                                                                                          >  1:334534/1‑141 (MQ=255)

              gATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGt                                                                                                                          >  1:294743/1‑141 (MQ=255)

               aTGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGtt                                                                                                                         <  1:486325/141‑1 (MQ=255)

                     ttCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAAtgtgatacaggaacctcatattccgta                                                                                                                   <  1:479540‑M1/141‑28 (MQ=255)

                       cacaAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATc                                                                                                                 <  1:682832/141‑1 (MQ=255)

                       cacaAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATc                                                                                                                 <  1:55551/141‑1 (MQ=255)

                        acaAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATca                                                                                                                >  1:192808/1‑141 (MQ=255)

                           aaTTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAt                                                                                                             <  1:518020‑M2/141‑2 (MQ=255)

                             tttATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAc                                                                                                                                      >  1:754268/1‑114 (MQ=255)

                             tttATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAc                                                                                                                                      <  2:754268/114‑1 (MQ=255)

                             tttATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAtta                                                                                                           <  2:58632‑M2/141‑4 (MQ=255)

                              ttATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAAtgtgatacaggaacctcatattccgtatcatgttag                                                                                                          <  2:292666‑M1/141‑37 (MQ=255)

                              ttATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttag                                                                                                          <  2:638446‑M2/141‑5 (MQ=255)

                               tATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttaga                                                                                                         <  1:545522‑M2/141‑6 (MQ=255)

                               tATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttaga                                                                                                         >  2:119487‑M2/1‑136 (MQ=255)

                                 tCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaag                                                                                                       <  2:465808‑M2/141‑8 (MQ=255)

                                 tCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttag                                                                                                          >  1:377131‑M2/1‑134 (MQ=255)

                                 tCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttag                                                                                                          <  2:377131‑M2/138‑5 (MQ=255)

                                 tCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTACTGTATCACAttagaag                                                                                                       <  1:754226‑M2/141‑8 (MQ=255)

                                  tacTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaagc                                                                                                      >  2:542773‑M2/2‑133 (MQ=255)

                                   aCTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAAtgtgatacaggaacctcatattccgtatcatgttagaagct                                                                                                     <  1:46064‑M1/141‑42 (MQ=255)

                                      aTTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaagctttt                                                                                                  >  1:162416‑M2/1‑129 (MQ=255)

                                       ttttGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCttttt                                                                                                 >  2:715049/1‑141 (MQ=255)

                                        tttGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGATCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCtttttt                                                                                                >  1:207054/1‑141 (MQ=255)

                                         ttGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTttg                                                                                               <  2:487551/141‑1 (MQ=255)

                                              aaaTTAAGAAATATTTAATTATATAAAAGTTTAATAGGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCCTCTATCATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCg                                                                                          <  2:630727/141‑1 (MQ=255)

                                                   aaGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCt                                                                                     >  1:52980/1‑141 (MQ=255)

                                                      aaaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtat                                                                                  <  2:465865/141‑1 (MQ=255)

                                                       aaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtata                                                                                 <  1:646981/141‑1 (MQ=255)

                                                       aaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtata                                                                                 <  1:46185/141‑1 (MQ=255)

                                                        atatTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTatat                                                                                >  2:689728/1‑141 (MQ=255)

                                                          atTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATta                                                                              <  2:496137/141‑1 (MQ=255)

                                                           tttAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATtaa                                                                             <  1:448890/141‑1 (MQ=255)

                                                             tAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATtaata                                                                           >  2:722802/1‑141 (MQ=255)

                                                              aaTTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTGCGTTTCTTATATtaataa                                                                          >  2:320372/1‑141 (MQ=255)

                                                                ttATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATg                                                                        <  2:460648/141‑1 (MQ=255)

                                                                   tataAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCa                                                                     <  2:675426/141‑1 (MQ=255)

                                                                   tataAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCa                                                                     <  1:493543/141‑1 (MQ=255)

                                                                     taAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatg                                                                   <  1:240309/141‑1 (MQ=255)

                                                                      aaaaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatga                                                                  <  2:159677/141‑1 (MQ=255)

                                                                       aaaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGc                                                                                      >  1:736250/1‑120 (MQ=255)

                                                                       aaaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGc                                                                                      <  2:736250/120‑1 (MQ=255)

                                                                        aaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgaat                                                                <  1:31646/141‑1 (MQ=255)

                                                                         aGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgaatg                                                               <  1:531779/141‑1 (MQ=255)

                                                                             taataaGTCAGAAAATATGATAAAATGTAGATGATCTCTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACg                                                           >  1:612795/1‑141 (MQ=255)

                                                                              aataaGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGc                                                          <  1:532903/141‑1 (MQ=255)

                                                                                       gAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCt                                                 <  2:659541/141‑1 (MQ=255)

                                                                                         aaaTATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTa                                               >  2:353152/1‑141 (MQ=255)

                                                                                         aaaTATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTa                                               <  1:145242/141‑1 (MQ=255)

                                                                                         aaaTATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTa                                               >  2:163800/1‑141 (MQ=255)

                                                                                          aaTATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAg                                              >  1:17755/1‑141 (MQ=255)

                                                                                           atatGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGc                                             <  2:587223/141‑1 (MQ=255)

                                                                                            tatGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCt                                            >  2:306862/1‑141 (MQ=255)

                                                                                             atGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTc                                           <  1:431072/141‑1 (MQ=255)

                                                                                               gATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCa                                         >  1:16483/1‑141 (MQ=255)

                                                                                                 tAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAAtgtgatacaggaacctcatattccgtatcatgttag                                                                                                          <  1:74423‑M1/74‑37 (MQ=255)

                                                                                                 tAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAAtgtgatacaggaacctcatattccgtatcatgttag                                                                                                          >  2:74423‑M1/1‑38 (MQ=255)

                                                                                                  aaaaTGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGa                                      <  2:182739/141‑1 (MQ=255)

                                                                                                    aaTGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAAt                                    >  2:51166/1‑141 (MQ=255)

                                                                                                     aTGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATc                                   <  2:325071/141‑1 (MQ=255)

                                                                                                      tGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCa                                  <  2:515051/141‑1 (MQ=255)

                                                                                                         aGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCatat                               >  2:694797/1‑141 (MQ=255)

                                                                                                              ttCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCt                          <  1:32603/141‑1 (MQ=255)

                                                                                                              ttCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCt                          <  1:31886/141‑1 (MQ=255)

                                                                                                              ttCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCt                          <  1:98693/141‑1 (MQ=255)

                                                                                                                  ttAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTa                      >  2:433024/1‑141 (MQ=255)

                                                                                                                    aGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTaaa                    >  2:24746/1‑141 (MQ=255)

                                                                                                                      aCATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACt                  <  1:387419/141‑1 (MQ=255)

                                                                                                                       gctaattaaatcttAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACtt                 <  2:672457/128‑1 (MQ=255)

                                                                                                                       cATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACtt                 >  2:761452/1‑141 (MQ=255)

                                                                                                                          tAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCg              <  1:335692/141‑1 (MQ=255)

                                                                                                                          tAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCg              >  1:282813/1‑141 (MQ=255)

                                                                                                                          tAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCg              >  2:506333/1‑141 (MQ=255)

                                                                                                                           aaaaGCTTCTAAtgtgatacaggaacctcatattccgtatcatgttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaat             >  1:162416‑M1/1‑12 (MQ=255)

                                                                                                                             aaGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTTTTTTTTTTATATTAATAATGGCATGAATAAACGCATGTGGTCTTAGCTTTAAGAATCATATAATCTATTACACttaagttt           >  2:429659/1‑135 (MQ=255)

                                                                                                                              aGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagt          <  1:46064‑M2/141‑101 (MQ=255)

                                                                                                                               gCTTCTAAtgtgatacaggaacctcatattccgtatcatgttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagta         >  2:542773‑M1/1‑8 (MQ=255)

                                                                                                                               gCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCtt         <  1:102683/141‑1 (MQ=255)

                                                                                                                               gCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCtt         <  2:320170/141‑1 (MQ=255)

                                                                                                                                cTTCTAAtgtgatacagtaacctcatattccgtatcatgttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagtga        <  1:754226‑M1/141‑135 (MQ=255)

                                                                                                                                cTTCTAAtgtgatacaggaacctcatattccgtatcatgttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagtga        <  2:465808‑M1/141‑135 (MQ=255)

                                                                                                                                cTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCttt        >  2:450280/1‑141 (MQ=255)

                                                                                                                                  tCTAAtgtgatacaggaacctcatattccgtatcatgttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagtgata      >  2:119487‑M1/1‑5 (MQ=255)

                                                                                                                                  tCTAAtgtgatacaggaacctcatattccgtatcatgttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagtgata      <  1:545522‑M1/141‑137 (MQ=255)

                                                                                                                                   cTAAtgtgatacaggaacctcatattccgtatcatgttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagtgataa     <  2:638446‑M1/141‑138 (MQ=255)

                                                                                                                                   cTAAtgtgatacaggaacctcatattccgtatcatgttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagtga        >  1:377131‑M1/1‑4 (MQ=255)

                                                                                                                                   cTAAtgtgatacaggaacctcatattccgtatcatgttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagtga        <  2:377131‑M1/138‑135 (MQ=255)

                                                                                                                                   cTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaagcttttaatgtctaaagaacatctacatttta                                                                        <  1:74423‑M2/74‑39 (MQ=255)

                                                                                                                                   cTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaagcttttaatgtctaaagaacatctacatttta                                                                        >  2:74423‑M2/1‑36 (MQ=255)

                                                                                                                                    tAAtgtgatacaggaacctcatattccgtatcatgttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagtgataaa    <  2:58632‑M1/141‑139 (MQ=255)

                                                                                                                                    tAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAat    <  1:499151/141‑1 (MQ=255)

                                                                                                                                     aaCATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAata   >  1:273998/1‑141 (MQ=255)

                                                                                                                                      atgtgatacaggaacctcatattccgtatcatgttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagtgataaatt  <  1:518020‑M1/141‑141 (MQ=255)

ATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATAT  >  CP000730/2609272‑2609546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.