BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2609406	77 (1.180)	5 (0.080)	4/234	NT	6.2%	intergenic (‑236/‑199)	USA300HOU_2471/USA300HOU_2472	hypothetical protein/hypothetical protein
*	?	CP000730	= 2609438	81 (1.370)	5 (0.080)	4/234	NT	6.2%	intergenic (‑268/‑167)	USA300HOU_2471/USA300HOU_2472	hypothetical protein/hypothetical protein

Only 100 of 103 total aligned reads displayed.

AATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAG  >  CP000730/2609299‑2609574

aaTTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAt                                                                                                                                         <  1:518020‑M2/141‑2 (MQ=255)

  tttATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAtta                                                                                                                                       <  2:58632‑M2/141‑4 (MQ=255)

   ttATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttag                                                                                                                                      <  2:638446‑M2/141‑5 (MQ=255)

    tATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttaga                                                                                                                                     >  2:119487‑M2/1‑136 (MQ=255)

    tATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttaga                                                                                                                                     <  1:545522‑M2/141‑6 (MQ=255)

      tCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaag                                                                                                                                   <  2:465808‑M2/141‑8 (MQ=255)

      tCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttag                                                                                                                                      <  2:377131‑M2/138‑5 (MQ=255)

      tCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttag                                                                                                                                      >  1:377131‑M2/1‑134 (MQ=255)

      tCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTACTGTATCACAttagaag                                                                                                                                   <  1:754226‑M2/141‑8 (MQ=255)

       tacTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaagc                                                                                                                                  >  2:542773‑M2/2‑133 (MQ=255)

           aTTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaagctttt                                                                                                                              >  1:162416‑M2/1‑129 (MQ=255)

            ttttGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCttttt                                                                                                                             >  2:715049/1‑141 (MQ=255)

             tttGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGATCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCtttttt                                                                                                                            >  1:207054/1‑141 (MQ=255)

              ttGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTttg                                                                                                                           <  2:487551/141‑1 (MQ=255)

               tGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTttgt                                                                                                                          <  1:467665/141‑1 (MQ=255)

                   aaaTTAAGAAATATTTAATTATATAAAAGTTTAATAGGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCCTCTATCATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCg                                                                                                                      <  2:630727/141‑1 (MQ=255)

                        aaGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCt                                                                                                                 >  1:52980/1‑141 (MQ=255)

                           aaaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtat                                                                                                              <  2:465865/141‑1 (MQ=255)

                            aaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtata                                                                                                             <  1:646981/141‑1 (MQ=255)

                            aaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtata                                                                                                             <  1:46185/141‑1 (MQ=255)

                             atatTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTatat                                                                                                            >  2:689728/1‑141 (MQ=255)

                               atTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATta                                                                                                          <  2:496137/141‑1 (MQ=255)

                                tttAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATtaa                                                                                                         <  1:448890/141‑1 (MQ=255)

                                  tAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATtaata                                                                                                       >  2:722802/1‑141 (MQ=255)

                                   aaTTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTGCGTTTCTTATATtaataa                                                                                                      >  2:320372/1‑141 (MQ=255)

                                     ttATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATg                                                                                                    <  2:460648/141‑1 (MQ=255)

                                        tataAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCa                                                                                                 <  1:493543/141‑1 (MQ=255)

                                        tataAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCa                                                                                                 <  2:675426/141‑1 (MQ=255)

                                          taAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatg                                                                                               <  1:240309/141‑1 (MQ=255)

                                           aaaaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatga                                                                                              <  2:159677/141‑1 (MQ=255)

                                            aaaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGc                                                                                                                  <  2:736250/120‑1 (MQ=255)

                                            aaaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGc                                                                                                                  >  1:736250/1‑120 (MQ=255)

                                             aaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgaat                                                                                            <  1:31646/141‑1 (MQ=255)

                                              aGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgaatg                                                                                           <  1:531779/141‑1 (MQ=255)

                                                 ttAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAAc                                                                                        <  2:612121/141‑1 (MQ=255)

                                                  taataaGTCAGAAAATATGATAAAATGTAGATGATCTCTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACg                                                                                       >  1:612795/1‑141 (MQ=255)

                                                    ataaGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCa                                                                                     >  1:690270/1‑141 (MQ=255)

                                                            gAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCt                                                                             <  2:659541/141‑1 (MQ=255)

                                                              aaaTATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTa                                                                           >  2:163800/1‑141 (MQ=255)

                                                              aaaTATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTa                                                                           <  1:145242/141‑1 (MQ=255)

                                                              aaaTATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTa                                                                           >  2:353152/1‑141 (MQ=255)

                                                               aaTATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAg                                                                          >  1:17755/1‑141 (MQ=255)

                                                                atatGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGc                                                                         <  2:587223/141‑1 (MQ=255)

                                                                 tatGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCt                                                                        >  2:306862/1‑141 (MQ=255)

                                                                  atGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTc                                                                       <  1:431072/141‑1 (MQ=255)

                                                                    gATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCa                                                                     >  1:16483/1‑141 (MQ=255)

                                                                       aaaaTGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGa                                                                  <  2:182739/141‑1 (MQ=255)

                                                                        aaaTGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGaa                                                                 >  1:544084/1‑141 (MQ=255)

                                                                         aaTGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAAt                                                                >  2:51166/1‑141 (MQ=255)

                                                                          aTGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATc                                                               <  2:325071/141‑1 (MQ=255)

                                                                           tGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCa                                                              <  2:515051/141‑1 (MQ=255)

                                                                              aGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCatat                                                           >  2:694797/1‑141 (MQ=255)

                                                                                   ttCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCt                                                      <  1:98693/141‑1 (MQ=255)

                                                                                   ttCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCt                                                      <  1:32603/141‑1 (MQ=255)

                                                                                   ttCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCt                                                      >  2:700951/1‑141 (MQ=255)

                                                                                   ttCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCt                                                      <  1:31886/141‑1 (MQ=255)

                                                                                     cTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTAt                                                    <  1:362554/141‑1 (MQ=255)

                                                                                       ttAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTa                                                  >  2:433024/1‑141 (MQ=255)

                                                                                         aGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTaaa                                                >  2:24746/1‑141 (MQ=255)

                                                                                           aCATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACt                                              <  1:387419/141‑1 (MQ=255)

                                                                                            gctaattaaatcttAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACtt                                             <  2:672457/128‑1 (MQ=255)

                                                                                            cATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACtt                                             <  1:99607/141‑1 (MQ=255)

                                                                                            cATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACtt                                             >  2:761452/1‑141 (MQ=255)

                                                                                               tAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCg                                          >  2:506333/1‑141 (MQ=255)

                                                                                               tAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCg                                          <  1:335692/141‑1 (MQ=255)

                                                                                               tAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCg                                          >  1:282813/1‑141 (MQ=255)

                                                                                                   aGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagt                                      <  1:46064‑M2/141‑101 (MQ=255)

                                                                                                    gCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCtt                                     <  1:102683/141‑1 (MQ=255)

                                                                                                    gCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCtt                                     <  2:320170/141‑1 (MQ=255)

                                                                                                     cTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTGTGGTGCTTATACTAATAATGGCATAAATGAACGCTCGCTGTCTTAGCTCCAAGAATCACATAAGCTATTAAACTTCCGTGCtat                                    >  2:42943/1‑139 (MQ=255)

                                                                                                     cTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCttt                                    >  2:450280/1‑141 (MQ=255)

                                                                                                        cTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagtgataa                                 <  2:292666‑M2/141‑106 (MQ=255)

                                                                                                        cTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaagcttttaatgtctaaagaacatctacatttta                                                                                                    >  2:74423‑M2/1‑36 (MQ=255)

                                                                                                        cTAACATGATACGGAATATGAGGTTCCTGTATCACAttagaagcttttaatgtctaaagaacatctacatttta                                                                                                    <  1:74423‑M2/74‑39 (MQ=255)

                                                                                                         tAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAat                                <  1:499151/141‑1 (MQ=255)

                                                                                                          aaCATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAata                               >  1:273998/1‑141 (MQ=255)

                                                                                                          aaCATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAata                               >  1:254280/1‑141 (MQ=255)

                                                                                                             aTGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATAttt                            <  1:347725/141‑1 (MQ=255)

                                                                                                             aTGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATAttt                            <  2:207054/141‑1 (MQ=255)

                                                                                                               gATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTTTTTTTTTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTATTTGAATAttttt                          >  2:324580/1‑141 (MQ=255)

                                                                                                                aTACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTTTTTTTTTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATAtttttt                         >  2:540393/1‑141 (MQ=255)

                                                                                                                aTACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATAtttttt                         <  1:634138/141‑1 (MQ=255)

                                                                                                                aTACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATAtttttt                         <  2:602507/141‑1 (MQ=255)

                                                                                                                 tACGGAATATGAGGTTCCTGTATCACAttagaagcttttaatgtctaaagaacatctacattttatcatattttctgacttattaaacttttatataattaaatatttcttaattttccaaaatagtgataaatttgtgaa                        <  1:479540‑M2/141‑115 (MQ=255)

                                                                                                                 tACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTa                        <  1:138476/141‑1 (MQ=255)

                                                                                                                    ggAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGAATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAAtt                     >  1:659326/1‑141 (MQ=255)

                                                                                                                     gAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAAttt                    <  1:266684/141‑1 (MQ=255)

                                                                                                                     gAATATGAGGTTCCTGTATCACATTAGAAGCTTTTCTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAAttt                    >  1:685439/1‑141 (MQ=255)

                                                                                                                      aaTATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTc                   >  2:412025/1‑141 (MQ=255)

                                                                                                                      aaTATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAAGGTCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAACCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTc                   <  1:566598/141‑1 (MQ=255)

                                                                                                                       atatGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTTAATATTTTTTAATctct                  >  2:696693/1‑141 (MQ=255)

                                                                                                                       atatGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCt                  >  2:553479/1‑141 (MQ=255)

                                                                                                                        tatGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCCTATAAGCTATTAAAATTCCGTTCTTTGAATATTTTTTAATTTCtt                 >  1:233994/1‑141 (MQ=255)

                                                                                                                        tatGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCtt                 >  1:233979/1‑141 (MQ=255)

                                                                                                                          tGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTAc               >  2:579928/1‑141 (MQ=255)

                                                                                                                          tGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTAc               >  1:499699/1‑141 (MQ=255)

                                                                                                                               ttCCTGTATCACATTAGAAGCTTTTTTGTTGCTTTGCTTATATTAAAAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTACGATCTTTGAATATTTTTTAATTTATTACTAata          >  2:774681/1‑141 (MQ=255)

                                                                                                                                 ccTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATatc        <  2:371362/141‑1 (MQ=255)

                                                                                                                                       tCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAg  <  1:586173/141‑1 (MQ=255)

                                                                                                                                       tCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAg  >  2:118526/1‑141 (MQ=255)

AATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAG  >  CP000730/2609299‑2609574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.