New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2679966	53 (0.810)	4 (0.070)	3/228	NT	7.2%	intergenic (+18/+514)	cbpD/USA300HOU_2537	possible secretory antigen/hypothetical protein
	?	CP000730	= 2679991	56 (0.970)					intergenic (+43/+489)	cbpD/USA300HOU_2537	possible secretory antigen/hypothetical protein

GTTGAACAAGTATATAAAAACGGTAGTATTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCATCTTTAGCATAATCTAT  >  CP000730/2679826‑2680105                                                                                                                                             |                                                                                                                                            gttgAACAAGTATATAAAAACGGTAGTATTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCAC                                                                                                                                             >  1:391788‑M1/1‑141 (MQ=255)   agAACAAGTATATAAAAACGGTAGTATTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTATAACTATATTTACTAATCAAAAAACTTCTATCACGa                                                                                                                                           >  2:501407/2‑141 (MQ=255)   agAACAAGTATATAAAAACGGTAGTATTAAAGTTTCAGAATACAAATTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAACAGGCAGCACGTAACTATAACTATATTTACTAATCAAAAAACTTCTATCACGa                                                                                                                                           >  2:109264/2‑141 (MQ=255)      aCAAGTATATAAAAACGGTAGTATTAAAGTTTCAGACTACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACg                                                                                                                                        <  1:176437/141‑1 (MQ=255)      aCAAGTATATAAAAACGGTAGTATTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACg                                                                                                                                        <  1:301786/141‑1 (MQ=255)        aaGTATATAAAAACGGTAGTATTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCt                                                                                                                                      <  1:138374/141‑1 (MQ=255)          gTATATAAAAACGGTAGTATTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTc                                                                                                                                    >  1:573514/1‑141 (MQ=255)           tatataAAAACGGTAGTATTAAAGTTTCAGAATACAACTTTTATCGACCATTAAAATACAATACACGTGTACCAAGCAAAAAGGCAGCACGTAACTTTAACTATAAAAAAAAAAAAAAAAACTTCTATCACGAACGCTTCa                                                                                                                                   <  2:526604/141‑1 (MQ=255)                 aaaaTGTTAGTATTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAGAAAGGCAGCACGTAACTTTAACTATATTTATTAAGCAAAAAACTTCTATCACGAACGCTTCAATTTcc                                                                                                                             <  2:272398/141‑1 (MQ=39)                 aaaaCGGTAGTATTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTcc                                                                                                                             >  1:44978/1‑141 (MQ=255)                     cGGTAGTATTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTa                                                                                                                         <  1:123816/141‑1 (MQ=255)                      ggTAGTATTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTAt                                                                                                                        >  1:455222/1‑141 (MQ=255)                       gtagtaTTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATg                                                                                                                       >  1:638695/1‑141 (MQ=255)                        tagtaTTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGc                                                                                                                      >  2:315965/1‑141 (MQ=255)                          gtaTTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgttc                                                                                                                    <  1:385856‑M1/141‑26 (MQ=255)                          gtaTTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgttc                                                                                                                    <  1:385838‑M1/141‑26 (MQ=255)                          gtaTTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCgt                                                                                                                    >  2:339626/1‑141 (MQ=255)                          gtaTTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCgt                                                                                                                    <  2:225709/141‑1 (MQ=255)                          gtaTTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCgt                                                                                                                    >  1:370514/1‑141 (MQ=255)                               aaaGTTTCAGAATACAACTTTTATCGCCCATGAAAATAAAATACCCGCGTACTAAGCAAAAAGGCAGCAAGTAACTTTAACTATATTTACTAATCAACAAACTTCTATCACGAACACTTCAATCTCCTGTATTCGTctgat                                                                                                               <  2:675735‑M2/141‑6 (MQ=255)                                aaGTTTCAGAATACAACTTTTATCGAACATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATATACTAAACAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgata                                                                                                              >  2:708349‑M2/1‑135 (MQ=255)                                    ttCAGAATACAACTTTTATCGCCCATAAAAATACAATACACGTGTACTAAGCAAAACGGCAGCACGTAACCTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaag                                                                                                          <  2:214299‑M2/141‑11 (MQ=255)                                     tCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagt                                                                                                         <  2:728260‑M2/141‑12 (MQ=255)                                      cAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagtt                                                                                                        <  2:586603‑M2/141‑13 (MQ=255)                                      cAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagtt                                                                                                        <  1:133234‑M2/141‑13 (MQ=255)                                      cAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagtt                                                                                                        <  1:444442‑M2/141‑13 (MQ=255)                                       aGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttt                                                                                                       >  2:140981‑M2/1‑128 (MQ=255)                                        gAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagtttt                                                                                                      <  1:194463‑M2/141‑15 (MQ=255)                                        gAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagtttt                                                                                                      >  2:216375‑M2/1‑127 (MQ=255)                                                cTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattag                                                                                              <  2:446883‑M1/141‑48 (MQ=255)                                                 ttttATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagt                                                                                             <  1:323833‑M1/141‑49 (MQ=255)                                                    tATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGaaa                                                                                          >  1:531507/1‑141 (MQ=255)                                                    tATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGaaa                                                                                          >  1:255010/1‑141 (MQ=255)                                                       cGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAatta                                                                                       >  2:519711/1‑141 (MQ=255)                                                         cccATTANAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAActtata                                                                                     <  2:590382/141‑1 (MQ=255)                                                             ttAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAattatattat                                                                                 <  2:111248/141‑1 (MQ=255)                                                              tAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCTCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCCCGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATattatt                                                                                <  2:330833/141‑1 (MQ=255)                                                                   tacaatacaCGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTc                                                                           >  1:278568/1‑141 (MQ=255)                                                                   tacaatacaCGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTc                                                                           >  2:189846/1‑141 (MQ=255)                                                                     caatacaCGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTa                                                                         >  1:405695/1‑141 (MQ=255)                                                                       atacaCGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACa                                                                       <  1:322729/141‑1 (MQ=255)                                                                          cacGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAAt                                                                    >  1:299088/1‑141 (MQ=255)                                                                            cGTGTTCTAAGCCATAACCCAGCCCGTAACCTTAACTATATTTAATCATCAAAAATCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTCCTTCTTCAAtttc                                                                  <  2:768055/141‑2 (MQ=18)                                                                             gtgtACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTc                                                                 <  2:637019/141‑1 (MQ=255)                                                                               gtACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTCTTTTATGAAATTATATTATTACTTCTACAAATTTCaa                                                               >  1:35294/1‑141 (MQ=255)                                                                                tACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAANTTTCaaa                                                              >  2:591385/1‑141 (MQ=255)                                                                                tACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCaaa                                                              <  1:590961/141‑1 (MQ=255)                                                                                           aaGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAAtt                                                   >  1:113882/1‑141 (MQ=255)                                                                                              gcagcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGaa                                                >  2:503165/1‑141 (MQ=255)                                                                                                agcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATGTCAAATTGCCGTAATTGAACg                                              >  2:32779/1‑141 (MQ=255)                                                                                                 gcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGt                                             >  2:506762/1‑141 (MQ=255)                                                                                                 gcaCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGt                                             <  2:499677/141‑1 (MQ=255)                                                                                                 gcaCGTAACATTAACTATATTTACTAATGAAAATACTTCTATCACGAACGCTTCAATTTGCTGTAAGCGTGGGATAGGAGTGTGTTTTGTATTAAATAATATTATTACTTCTACACATTTGAAAGTGCCGTAATTGAACgg                                             >  2:136026/1‑140 (MQ=21)                                                                                                  caCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGta                                            <  1:495264/141‑1 (MQ=255)                                                                                                  caCGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGta                                            <  2:693000/141‑1 (MQ=255)                                                                                                  caCGTAACTTTAACTATAATTACTAAACAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGta                                            <  2:693075/141‑1 (MQ=255)                                                                                                    cGTAGCTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGtata                                          <  1:730661/141‑1 (MQ=255)                                                                                                    cGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGtata                                          >  1:485140/1‑141 (MQ=255)                                                                                                              aCTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATttcttcttc                                >  1:704727/1‑141 (MQ=255)                                                                                                                tataTTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCaa                              >  1:694894/1‑141 (MQ=255)                                                                                                                tataTTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCaa                              <  2:18594/141‑1 (MQ=255)                                                                                                                  tatTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACt                            >  2:152517/1‑141 (MQ=255)                                                                                                                       aCTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttagtacacgtgtattgtattttaatgggcgataaaa                       <  1:323833‑M2/141‑94 (MQ=255)                                                                                                                        cTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttagtacacgtgtattgtattttaatgggcgataaaag                      <  2:446883‑M2/141‑95 (MQ=255)                                                                                                                        cTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTattatt                      <  1:693166/141‑1 (MQ=255)                                                                                                                            tCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCAt                  >  1:711799/1‑141 (MQ=255)                                                                                                                              aaaaaaCTTCTATCACGAACGCTTCAATTTCCCGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCATCt                >  2:475578/1‑141 (MQ=255)                                                                                                                                aaaaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttagtacacgtgtattgtattttaatgggcgataaaagttgtattc              <  1:194463‑M1/141‑128 (MQ=255)                                                                                                                                aaaaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttagtacacgtgtattgtattttaatgggcgataaaagttgtattc              >  2:216375‑M1/1‑14 (MQ=255)                                                                                                                                 aaaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttagtacacgtgtattgtattttaatgggcgataaaagttgtattct             >  2:140981‑M1/1‑13 (MQ=255)                                                                                                                                  aaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttagtacacgtgtattgtattttaatgggcgataaaagttgtattctg            <  2:586603‑M1/141‑130 (MQ=255)                                                                                                                                  aaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttagtacacgtgtattgtattttaatgggcgataaaagttgtattctg            <  1:133234‑M1/141‑130 (MQ=255)                                                                                                                                  aaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttagtacacgtgtattgtattttaatgggcgataaaagttgtattctg            <  1:444442‑M1/141‑130 (MQ=255)                                                                                                                                  aaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCATCTTTAg            <  1:755023/141‑1 (MQ=255)                                                                                                                                   aCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatatagttaaagttacgtgctgcctttttgcttagtacacgtgtattgtattttaatgggcgataaaagttgtattctga           <  2:728260‑M1/141‑131 (MQ=255)                                                                                                                                   aCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCATCTTTAGc           <  1:476332/141‑1 (MQ=255)                                                                                                                                   aCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCATCTTTAGc           <  1:619004/141‑1 (MQ=255)                                                                                                                                   aCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCATCTTTAGc           <  1:351693/141‑1 (MQ=255)                                                                                                                                    cTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatatagttaaggttacgtgctgccgttttgcttagtacacgtgtattgtatttttatgggcgataaaagttgtattctgaa          <  2:214299‑M1/141‑132 (MQ=255)                                                                                                                                    cTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCATCTTTAGCa          >  2:744991/1‑141 (MQ=255)                                                                                                                                        tATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgtttagtatatatagttaaagttacgtgctgcctttttgcttagtacacgtgtattgtattttaatgttcgataaaagttgtattctgaaactt      >  2:708349‑M1/1‑6 (MQ=255)                                                                                                                                        tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCATCTTTAGCATAAt      >  1:38314/1‑141 (MQ=255)                                                                                                                                        tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCATCTTTAGCATAAt      >  2:401056/1‑141 (MQ=255)                                                                                                                                         aTCAGacgaatacaggagattgaagtgttcgtgatagaagtttgttgattagtaaatatagttaaagttacttgctgcctttttgcttagtacgcgggtattttattttcatgggcgataaaagttgtattctgaaacttt     <  2:675735‑M1/141‑137 (MQ=255)                                                                                                                                         aTCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAGATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCATCTTTAGCATAATc     <  2:625136/141‑1 (MQ=255)                                                                                                                                          tCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTATTTGAACGTATATTTCTTCTTCAACTATTATTTCATCTTTAGCATTATCt    >  1:280472/1‑141 (MQ=255)                                                                                                                                            ccGAACTCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCATCTTTAGCATAATCtat  <  2:749535/140‑1 (MQ=255)                                                                                                                                             |                                                                                                                                            GTTGAACAAGTATATAAAAACGGTAGTATTAAAGTTTCAGAATACAACTTTTATCGCCCATTAAAATACAATACACGTGTACTAAGCAAAAAGGCAGCACGTAACTTTAACTATATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTATGAAATTATATTATTACTTCTACAAATTTCAAATTGCCGTAATTGAACGTATATTTCTTCTTCAACTATTATTTCATCTTTAGCATAATCTAT  >  CP000730/2679826‑2680105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.