New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	190272 =	64 (0.980)	3 (0.050)	3/244	NT	5.1%	coding (824/1176 nt)	cap5P	capsular polysaccharide biosynthesis protein Cap5P
	?	CP000730	190304 =	52 (0.840)					coding (856/1176 nt)	cap5P	capsular polysaccharide biosynthesis protein Cap5P

AGATGTTGTCTTCATTTATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGAACATCGAGAGTAATTGGCACAGATTATGAC  >  CP000730/190165‑190444                                                                                                                                            |                                                                                                                                             aGATGTTGTCTTCATTTATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTa                                                                                                                                             <  2:284758/141‑1 (MQ=255)  gATGTTGTCTTCATTTATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTAc                                                                                                                                            >  1:458569/1‑141 (MQ=255)  gATGTTGTCTTCATTTATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTAc                                                                                                                                            >  2:609622/1‑141 (MQ=255)   aTGTTGTCTTCATTTATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGCTGCGATTGAGTTCCATAATTTTACAAATCAATCGTAcc                                                                                                                                           <  1:416642/141‑1 (MQ=255)        gtCTTCATTTATCCAATGCATCGTAATCCAAAGGTAAGCGTCAGTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTg                                                                                                                                      >  1:768870/1‑141 (MQ=255)          gttCATTTATACAATGCATCGTAATCCAAAGGTAGGAGCGATTGCCGAAAAATATTTATCTGGGAGAAAGCGGATTGAATTAATTAGGCCATTAGATGCGATGGAGCTTCATAATTTTACAAATCAATCGTACCTCGTGCt                                                                                                                                    >  2:508665/2‑141 (MQ=255)          cTTCATTTATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCt                                                                                                                                    <  1:319679/141‑1 (MQ=255)            tCATTTATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGa                                                                                                                                  <  2:58962/141‑1 (MQ=255)            tCATTTATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGa                                                                                                                                  <  2:727578/141‑1 (MQ=255)               tttATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAg                                                                                                                               <  1:364917/141‑1 (MQ=255)               tttATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCANTAGATGCGATTGAGTTCCNTAATTNTACAAATCAATCGNACCTCGTGCTGACAg                                                                                                                               <  2:201791/141‑1 (MQ=255)                 tATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGAt                                                                                                                             <  1:727037/141‑1 (MQ=255)                 tATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGAt                                                                                                                             >  1:86273/1‑141 (MQ=255)                 tATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGAt                                                                                                                             <  1:293758/141‑1 (MQ=255)                     cAATGCATCTTAATCCAAACGTAACGTCGATTGCCTAAAAAGATTTATCCCGTATAAAGCTAATTTAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCtg                                                                                                                         <  1:72255/141‑1 (MQ=255)                      aaTGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCtgg                                                                                                                        >  1:691198/1‑141 (MQ=255)                        tGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCtggtg                                                                                                                      <  1:110394/141‑1 (MQ=255)                         gCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAGTCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCtggtgg                                                                                                                     <  2:140313/141‑1 (MQ=255)                         gCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCtggtgg                                                                                                                     >  2:454762/1‑141 (MQ=255)                         gCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCtggtgg                                                                                                                     <  2:370530/141‑1 (MQ=255)                         gCATCGTAATCCAAAGGTAAGAGCGAGTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCtggtgg                                                                                                                     <  1:309669/141‑1 (MQ=255)                           ttCGTAATACAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTa                                                                                                                   <  2:332229/140‑1 (MQ=255)                           aTCGTAGTCAAAGGGGACGAGCGAGTGCCGAAAAATATTGATCTGGGAGGAATCGGATAGAATTAAGTGAGCCATTGGATGCGATTGGGTTCCGTGATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGGGGTa                                                                                                                   <  2:250381/141‑1 (MQ=255)                              gTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTc                                                                                                                >  2:413985/1‑141 (MQ=255)                                   ccAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAagag                                                                                                           <  2:75902/141‑1 (MQ=255)                                   ccAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAagag                                                                                                           >  2:753588/1‑141 (MQ=255)                                   ccAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAagag                                                                                                           >  2:326410/1‑141 (MQ=255)                                    cAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAgagg                                                                                                          >  1:76844/1‑141 (MQ=255)                                         gTAAGAGCGTTTGCCGAAAAATATTTATCTGGGGGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATATTTTTACAAATGAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCt                                                                                                     <  2:600932/141‑1 (MQ=255)                                         gTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGcc                                                                                                     >  2:357836/1‑140 (MQ=255)                                             gagCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTa                                                                                                 >  1:780174/1‑141 (MQ=255)                                                   ttGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTg                                                                                           >  2:612437/1‑141 (MQ=255)                                                       cGAAAAATATTTATCTGGGAGAAATCGGATTAAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCAGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGaaa                                                                                       >  2:381625/1‑141 (MQ=255)                                                            aaTATTTATCTGGGAGAAATCGGATTGAATTAATTGAGACATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCtg                                                                                  >  1:415790/1‑141 (MQ=255)                                                               atTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTgtgt                                                                               <  2:599311/141‑1 (MQ=255)                                                                tttATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGtt                                                                              <  1:357148/141‑1 (MQ=255)                                                                tttATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGtt                                                                              <  1:379638/141‑1 (MQ=255)                                                                tttATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGtt                                                                              <  1:681522/141‑1 (MQ=255)                                                                  tATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGG‑TGCTCCTACATTTGGAAAACCTGTGTTGGt                                                                           >  2:85268/1‑141 (MQ=255)                                                                    tCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTa                                                                          >  2:174089/1‑141 (MQ=255)                                                                      tGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTCCCTCGTGCTGACAGATTCTGGTGGTATTCGAAAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTAtt                                                                        <  1:573288/141‑1 (MQ=255)                                                                       gggAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTa                                                                       <  1:184819/141‑1 (MQ=255)                                                                          agaAATCGGATTGAATTAGTTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAgg                                                                    <  1:598266/141‑1 (MQ=255)                                                                                 ggATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATa                                                             >  2:385730/1‑141 (MQ=255)                                                                                  gATTGAATTAATTGAGCGATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTAGTGCTGACAGATTCTGGTGGTATTAAAGAGGAGGCTCCTACATTTGGAAAACCTGGGTTGGTATTAAGGGATCATAc                                                            >  2:727602/1‑141 (MQ=255)                                                                                  gATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATAc                                                            <  2:458827/141‑1 (MQ=255)                                                                                  gATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATAc                                                            <  2:171268/141‑1 (MQ=255)                                                                                      gAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACagag                                                        <  2:614906/141‑1 (MQ=255)                                                                                      gAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACagag                                                        <  2:765045/141‑1 (MQ=255)                                                                                                aGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAg                                              >  1:368248/1‑141 (MQ=255)                                                                                                 gCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAgg                                             >  1:224555/1‑141 (MQ=255)                                                                                                  ccATTAGATGGGATTGAGGTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGGTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGc                                            <  2:630122/141‑1 (MQ=255)                                                                                                           gCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCg                                   <  1:172685/141‑1 (MQ=255)                                                                                                           gCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCg                                   >  2:707023/1‑141 (MQ=255)                                                                                                            tGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGTATCATACAGAGCGTCCCGAAGGCGTTGAGGCgg                                  <  1:305953‑M1/140‑1 (MQ=255)                                                                                                            cgattgatttgtaaaattatggaactcaatcgTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACa                                                                                               >  1:506199‑M2/33‑80 (MQ=255)                                                                                                            cgattgatttgtaaaattatggaactcaatcgTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACa                                                                                               <  2:506199‑M2/48‑1 (MQ=255)                                                                                                            CGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACTTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCgg                                  >  2:500035‑M1/1‑141 (MQ=255)                                                                                                            CGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCgg                                  >  2:399864‑M1/1‑141 (MQ=255)                                                                                                            CGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCgg                                  >  2:617129‑M1/1‑141 (MQ=255)                                                                                                             GATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCggg                                 <  2:542643‑M1/141‑1 (MQ=255)                                                                                                             GATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCggg                                 >  2:446371‑M1/1‑141 (MQ=255)                                                                                                              gTTGAGTTGCATAGTTTTACAAGTCGATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCGAGAGGAGGCGCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGa                                >  2:204585‑M1/2‑141 (MQ=255)                                                                                                              ATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGa                                >  1:320015‑M1/1‑141 (MQ=255)                                                                                                                 gatttgtaaaattatggaactcaatcgTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGAACa                             >  1:35750‑M2/28‑141 (MQ=255)                                                                                                                 GAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGTGGCTGCTACAGGTGGAAAACCGGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGAACa                             <  1:744434‑M1/141‑1 (MQ=255)                                                                                                                      ccATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGAACATCgag                        <  2:246426/141‑1 (MQ=255)                                                                                                                               tACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGAACATCGAGAGTAATTgg               <  1:118437/141‑1 (MQ=255)                                                                                                                                 cAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGAACATCGAGAGTAATTGGca             >  1:89757/1‑141 (MQ=255)                                                                                                                                  aaaTCAATCGTACCTCGTGCTGACAGGTTATGGCGGTATTCGAGAGGAGGCCTCTACATTTGGAAAACCTGTGATGGTATTCAGGAATCATACATAGCGTCCCGACGGCGTTGAGGCAGGATAATCATGAGCAACTGGcac            <  2:390760/141‑1 (MQ=255)                                                                                                                                     tcaatcgTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGAACATCGAGAGTAATTGGCACAGa         >  2:693378‑M2/8‑141 (MQ=255)                                                                                                                                       tatcgTGCCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCGACATTTGGAACACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGAACATCGAGAGTAATTGGCACAGCtt       <  2:435067‑M2/136‑1 (MQ=255)                                                                                                                                         tcgTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGAACATCGAGAGTAATTGGCACAGATTAt     <  2:134951‑M2/138‑1 (MQ=255)                                                                                                                                            tACGTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGAACATCGAGAGTAATTGGCACAGATTATGAc  <  2:628997/141‑1 (MQ=255)                                                                                                                                            tACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGAACATCGAGAGTAATTGGCACAGATTATGAc  >  2:8339/1‑141 (MQ=255)                                                                                                                                            |                                                                                                                                             AGATGTTGTCTTCATTTATCCAATGCATCGTAATCCAAAGGTAAGAGCGATTGCCGAAAAATATTTATCTGGGAGAAATCGGATTGAATTAATTGAGCCATTAGATGCGATTGAGTTCCATAATTTTACAAATCAATCGTACCTCGTGCTGACAGATTCTGGTGGTATTCAAGAGGAGGCTCCTACATTTGGAAAACCTGTGTTGGTATTAAGGAATCATACAGAGCGTCCCGAAGGCGTTGAGGCGGGAACATCGAGAGTAATTGGCACAGATTATGAC  >  CP000730/190165‑190444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.