New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1218705 =	73 (1.120)	8 (0.140)	5/228	NT	11.3%	intergenic (+196/+67)	USA300HOU_1145/fbpA	possible 3‑demethylubiquinone‑9 3‑methyltransferase/fibrinogen‑binding protein
	?	CP000730	1218759 =	61 (1.060)					intergenic (+250/+13)	USA300HOU_1145/fbpA	possible 3‑demethylubiquinone‑9 3‑methyltransferase/fibrinogen‑binding protein

TAAAATCACAAAGATAATTTGTAACTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATGCACATTTTTAATTAATGT  >  CP000730/1218619‑1218894                                                                                                                                             |                                                                                                                                        tAAAATCACAAAGATAATTTGTAACTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTg                                                                                                                                         >  2:698281/1‑141 (MQ=255)   aaaTCACAAAGATAATTTGTAACTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTc                                                                                                                                       <  1:528107/141‑1 (MQ=255)     aTCACAAAGATAATTTGTAACTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTTTCGa                                                                                                                                     >  2:13661/1‑141 (MQ=255)     aTCACAAAGATAATTTGTAACTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGa                                                                                                                                     >  1:643080/1‑141 (MQ=255)        acaGAGATAATTTGTAACTTAAATGATGATACGTTATTTAAAAACACGCTACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTACTTTTGTGAGGTGTTTATTTCTCGACaa                                                                                                                                  >  2:11463/1‑141 (MQ=255)        acaAAGATAATTTGTAACTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACaa                                                                                                                                  >  1:336776/1‑141 (MQ=255)            aGATAATTTGTAACTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTg                                                                                                                              >  1:404892/1‑141 (MQ=255)            aGATAATTTGTAACTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTg                                                                                                                              <  1:135996/141‑1 (MQ=255)                    tGTAACTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGAt                                                                                                                      >  2:10845/1‑141 (MQ=255)                     gTAACTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGAtt                                                                                                                     >  2:528827/1‑141 (MQ=255)                        aCTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGtt                                                                                                                  <  1:490755/141‑1 (MQ=255)                        aCTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGtt                                                                                                                  <  1:605014/141‑1 (MQ=255)                        aCTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGtt                                                                                                                  <  1:205572/141‑1 (MQ=255)                        aCTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGtt                                                                                                                  <  2:247953/141‑1 (MQ=255)                          ttAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCTATCAACGAATTAAATAATAAATAAACACCTCACCATGAGTAAGGACTACTTACTTTTGTGAGGTGTTTATTTGTCGGCACCTTGTTTATGGTTGTTTc                                                                                                                <  2:750822/141‑1 (MQ=255)                          ttAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGGACGCATTAAAGAGGAAATAAACTCCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTc                                                                                                                <  1:662687/141‑1 (MQ=255)                            aaaTGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCAt                                                                                                              <  2:581498/141‑1 (MQ=255)                            aaaTGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCAt                                                                                                              >  1:413199/1‑141 (MQ=255)                              atgatgATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCAttt                                                                                                            <  2:627769/141‑1 (MQ=255)                               tgatgaTACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCAtttt                                                                                                           <  2:241642/141‑1 (MQ=255)                                gatgatACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTTTTTCAttttt                                                                                                          >  2:424658/1‑141 (MQ=255)                                          tATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGATGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGtt                                                                                                <  2:313798/141‑1 (MQ=255)                                            tttAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCa                                                                                              <  2:480839/141‑1 (MQ=255)                                               aaaaaCACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATaa                                                                                           <  2:539664/141‑1 (MQ=255)                                                aaaaCACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTCTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAAt                                                                                          >  1:151931/1‑141 (MQ=255)                                                   acacGATTCTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAg                                                                                       <  1:326700/141‑1 (MQ=255)                                                     acGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGgt                                                                                     >  2:443128/1‑141 (MQ=255)                                                        aTACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTa                                                                                  <  1:645020/141‑1 (MQ=255)                                                           cTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCa                                                                               <  2:336776/141‑1 (MQ=255)                                                              cGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATTATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATAc                                                                            <  1:37043/141‑1 (MQ=255)                                                              cGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGCTTGTTTCATTTTTTTAATTTGTTCATAATCAGTTGTAGCAtcc                                                                            >  2:681517/1‑139 (MQ=255)                                                                      tGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGtttt                                                                    <  1:41438/141‑1 (MQ=255)                                                                      tGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGtttt                                                                    <  1:41449/141‑1 (MQ=255)                                                                       gAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGttttt                                                                   >  2:491946/1‑141 (MQ=255)                                                                       gAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGttttt                                                                   >  2:10215/1‑141 (MQ=255)                                                                       gAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTAATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGttttt                                                                   <  2:269785/141‑1 (MQ=255)                                                                          cGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGa                                                                >  2:14692/1‑141 (MQ=255)                                                                             aTTAAATNATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTg                                                             <  2:588991/141‑1 (MQ=255)                                                                              ttAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGt                                                            <  2:695123/141‑1 (MQ=255)                                                                               taaataataaataaACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTc                                                           <  2:274228/141‑1 (MQ=255)                                                                                 aataataaataaACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCat                                                         >  2:733336/1‑141 (MQ=255)                                                                                 aataataaataaACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCat                                                         >  1:79254/1‑141 (MQ=255)                                                                                 aataataaataaACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCat                                                         >  1:192992/1‑141 (MQ=255)                                                                                   taataaataaACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCatat                                                       >  2:257976/1‑141 (MQ=255)                                                                                     ataaataaACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGt                                                     <  2:381784/141‑1 (MQ=255)                                                                                      taaataaaCACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGt                                                     >  1:433653/1‑140 (MQ=255)                                                                                      taaataaaCACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGt                                                     <  2:433653/140‑1 (MQ=255)                                                                                        AATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTAc                                                  >  1:508560‑M1/1‑141 (MQ=255)                                                                                            AACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCCTACAAAGTTTTTTGATTGTCATATGTTACAAAc                                              >  2:362967‑M1/1‑141 (MQ=255)                                                                                             ACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAAcc                                             >  1:495496‑M1/1‑141 (MQ=255)                                                                                                CCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAg                                          <  1:289064‑M1/141‑1 (MQ=255)                                                                                                  tcacaaaagaaagtagtcctttcttatggtgaggtgtttatttGTCGACAACTTGATTATGATTGTTTc                                                                                                                >  2:118736‑M2/44‑69 (MQ=255)                                                                                                  tcacaaaagaaagtagtcctttcttatggtgaggtgtttatttGTCGACAACTTGATTATGATTGTTTc                                                                                                                <  1:118736‑M2/26‑1 (MQ=255)                                                                                                  tcacaaaagaaagtagtcctttcttatggtgaggtgtttatttGTCGACAACTTGATTATGATTGTTTc                                                                                                                <  1:118711‑M2/26‑1 (MQ=255)                                                                                                  tcacaaaagaaagtagtcctttcttatggtgaggtgtttatttGTCGACAACTTGATTATGATTGTTTc                                                                                                                >  2:118711‑M2/44‑69 (MQ=255)                                                                                                  TCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGc                                        <  2:77918‑M1/141‑1 (MQ=255)                                                                                                   CACCATAACAAAGGACTACTTTCTTTTGTGCGGTGTTTATTTGTCTACAACTTGATTATGTTTGGTTCATGTTTTGAATAAGTTCATAAGCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCt                                       >  1:31669‑M1/1‑141 (MQ=255)                                                                                                    actaTAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCtt                                      <  1:673377/138‑1 (MQ=255)                                                                                                    acaaaagaaagtagtcctttcttatggtgaggtgtttatttGTCGACAACTTGATTATGATCGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCtt                                      >  1:30736‑M2/42‑141 (MQ=255)                                                                                                      cATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTTTTTTTTTTCATAATCAAGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACTCAGGCtttt                                    >  2:586539/1‑140 (MQ=255)                                                                                                        tAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCa                                  >  1:681154/1‑141 (MQ=255)                                                                                                        aagaaagtagtcctttcttatggtgaggtgtttatttGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCa                                  >  2:426910‑M2/38‑141 (MQ=255)                                                                                                         agaaagtagtcctttcttatggtgaggtgtttatttGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCAc                                 >  2:754714‑M2/37‑141 (MQ=255)                                                                                                         agaaagtagtcctttcttatggtgaggtgtttatttGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCAc                                 >  1:618530‑M2/37‑141 (MQ=255)                                                                                                         aaGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCAc                                 <  2:375838/141‑1 (MQ=255)                                                                                                          aGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCAcc                                <  1:500690/141‑1 (MQ=255)                                                                                                          aGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGGTACAAACCCAGGCTTTGCAcc                                >  2:273593/1‑141 (MQ=255)                                                                                                            aaaGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTg                              <  1:103396/141‑1 (MQ=255)                                                                                                             aaGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGa                             >  1:666648/1‑141 (MQ=255)                                                                                                             aaGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGa                             <  2:744529/141‑1 (MQ=255)                                                                                                              aGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGAt                            <  2:517948/141‑1 (MQ=255)                                                                                                                    actTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTTTTTTTTTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTa                      >  2:243645/1‑141 (MQ=255)                                                                                                                    actTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTa                      <  1:76120/141‑1 (MQ=255)                                                                                                                    actTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTa                      <  1:454969/141‑1 (MQ=255)                                                                                                                     ctttctttTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTTTTTTTTTTTTGTTACAAACCCAGGCTTTGCACCTGATGGttttt                     >  2:31582/1‑139 (MQ=255)                                                                                                                     ctttctttTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTAt                     <  1:581874/141‑1 (MQ=255)                                                                                                                      tttctttTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATg                    >  1:492088/1‑141 (MQ=255)                                                                                                                       ttctttTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATGc                   <  2:693047/141‑1 (MQ=255)                                                                                                                        tctttTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATGca                  <  2:187322/141‑1 (MQ=255)                                                                                                                          ttttGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCAGACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATGcaca                >  2:612225/1‑141 (MQ=255)                                                                                                                            ttGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATGCACAtt              <  2:404892/141‑1 (MQ=255)                                                                                                                             tgtgAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATGCACAttt             <  1:679516/141‑1 (MQ=255)                                                                                                                              gtgaggtgtttatttGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATGCACAtttt            >  1:699639‑M2/16‑141 (MQ=255)                                                                                                                                gaggtgtttatttGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATGCACATTTtta          <  1:443128‑M2/128‑1 (MQ=255)                                                                                                                                 aggtgtttatttGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATGCACATTTttaa         >  2:293909‑M2/13‑141 (MQ=255)                                                                                                                                       ttatttGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATGCACATTTTTAATTAATg   <  2:446701‑M2/135‑1 (MQ=255)                                                                                                                                        tatttGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATGCACATTTTTAATTAATGt  <  1:372815‑M2/136‑1 (MQ=255)                                                                                                                                             |                                                                                                                                        TAAAATCACAAAGATAATTTGTAACTTAAATGATGATACGTTATTTAAAAACACGATACTTCGTTTCAATGAACGCATTAAATAATAAATAAACACCTCACCATAAGAAAGGACTACTTTCTTTTGTGAGGTGTTTATTTGTCGACAACTTGATTATGATTGTTTCATTTTTTGAATAAGTTCATAATCAGGTGTAGCATACAAAGTTTTTTGATTGTCATATGTTACAAACCCAGGCTTTGCACCTGATGGTTTATGCACATTTTTAATTAATGT  >  CP000730/1218619‑1218894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.