New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1332949	42 (0.640)	3 (0.050)	3/222	NT	6.9%	intergenic (+159/+63)	hfq/bsaA	host factor‑I protein Hfq/glutathione peroxidase
	?	CP000730	= 1332971	45 (0.800)					intergenic (+181/+41)	hfq/bsaA	host factor‑I protein Hfq/glutathione peroxidase

AACGTTTGAAGTATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTAACAACGTTACCTTCGCGATCCACTAAAAACTTAGTG  >  CP000730/1332831‑1333111                                                                                                                                              |                                                                                                                                             aaCGTTTGAAGTATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGa                                                                                                                                              <  2:659209/141‑1 (MQ=255)  aCGTTTGAAGTATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAAGTCGAGTCAATATATGATACGAc                                                                                                                                             <  2:12015‑M2/141‑2 (MQ=255)   cGTTTGAAGTATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGAct                                                                                                                                            >  2:84926‑M2/1‑139 (MQ=255)      ttGAAGTATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGActt                                                                                                                                           >  2:189892‑M2/1‑136 (MQ=255)      ttGAAGTATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGActt                                                                                                                                           <  1:189892‑M2/139‑4 (MQ=255)       tGAAGTATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGActttat                                                                                                                                        <  1:486330‑M2/141‑7 (MQ=255)         aaGTATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGActttatat                                                                                                                                      <  1:748990‑M2/141‑9 (MQ=255)         aaGTACGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGActttatat                                                                                                                                      <  1:121799‑M2/141‑9 (MQ=255)          aGTATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGActttatatg                                                                                                                                     <  2:740620‑M2/141‑10 (MQ=255)          aGTATGATAAATAGATATAGAAACAAAGACATATGTGATATCAATTAAATGATGT‑TCAAATGACAAGATACAAGAGAGGTATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGCcattatatt                                                                                                                                     <  1:157057‑M2/141‑10 (MQ=255)          aGTAGGAGAAATAGAGATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGAatttatatg                                                                                                                                     <  2:740793‑M2/141‑10 (MQ=255)            tATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGActttatatgaa                                                                                                                                   >  1:648043‑M2/1‑130 (MQ=255)              tGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGActttatatgaagc                                                                                                                                 >  2:497199‑M2/1‑128 (MQ=255)                  aaaTAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGActttatatgaagcgttt                                                                                                                             <  2:639715‑M2/141‑18 (MQ=255)                     tAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTAt                                                                                                                          <  1:250348/141‑1 (MQ=255)                          ataGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCt                                                                                                                     <  2:773019/141‑1 (MQ=255)                               aaTAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAg                                                                                                                >  2:770140/1‑141 (MQ=255)                                 tAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCt                                                                                                              >  2:719571/1‑141 (MQ=255)                                   aaGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAg                                                                                                            >  2:86124/1‑141 (MQ=255)                                           tgtgACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATAtttt                                                                                                    <  1:456080/141‑1 (MQ=255)                                           tgtgACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATAtttt                                                                                                    <  1:591263/141‑1 (MQ=255)                                            tgaaCATCATTTAATTGATGTCACATATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATAtttt                                                                                                    >  2:494218/4‑141 (MQ=255)                                              gACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTtata                                                                                                 <  1:770140/141‑1 (MQ=255)                                                   cAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATaataat                                                                                            >  1:383043/1‑141 (MQ=255)                                                       tAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAAttttt                                                                                        <  1:60969/141‑1 (MQ=255)                                                        aaaTGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTc                                                                                       >  2:421764/1‑141 (MQ=255)                                                            aatgT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTAtt                                                                                   <  2:189817/140‑1 (MQ=255)                                                                     aaTGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATACTTTTTCTATTTCTCTTTc                                                                           >  1:402806/1‑141 (MQ=255)                                                                       tGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGa                                                                         <  1:678508/141‑1 (MQ=255)                                                                          cAAGATACAATAGAGGAATGATTGTAATAAAAACGCTTCATATAAAGATCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGAttt                                                                      >  2:322728/1‑141 (MQ=255)                                                                               tACAATAGAGTAATGTTTGTAAGAAATGCGGTTCATATAAAGGTCGAGTCAATCTATGGTACGGCTTTATATGACGCGTTTTATTTGCTATGTGCTAGTATATTTTATAATGATTTTTCTATGTCTCTTTCGATTTGAACa                                                                 <  2:365237/141‑1 (MQ=255)                                                                                aCAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAg                                                                <  1:740620/141‑1 (MQ=255)                                                                                 cAATAGTGGAATGTTTGTAATAAAGACGCTGCATATAAAGGTCGAGTCAATATATGATACTTCTTTGTATGAAGCGATTTATTTGCTATGACCTAGTATACTTTATAATAAATACTCTATTTTTATTTCGATTTGAACAgg                                                               >  2:324407/1‑141 (MQ=255)                                                                                   aTAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGtt                                                             <  1:433492/141‑1 (MQ=255)                                                                                                tGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGc                                                <  1:164762/141‑1 (MQ=255)                                                                                                  taataaAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCaa                                              <  2:696110/141‑1 (MQ=255)                                                                                                  taataaAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCaa                                              >  1:521662/1‑141 (MQ=255)                                                                                                   aataaAGACGCTTCATATAAAGGTCGAGTAAATATATGATACGCCTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTTAGGTGCaaa                                             <  1:369610/141‑1 (MQ=255)                                                                                                   aataaAAACCCTTTATATTAAGGTCGAGTCAATATATGATCCGACTTTATATGAAGCGTTTTATTTTCTATCAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTTAGGTGCaaa                                             <  1:369537/141‑1 (MQ=255)                                                                                                    ataaAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAAt                                            <  2:478662/141‑1 (MQ=255)                                                                                                    ataaAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAAt                                            <  2:478549/141‑1 (MQ=255)                                                                                                      aaaaaCGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCg                                          >  1:212270/1‑141 (MQ=255)                                                                                                        aaaCGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGTAAATCGtt                                        >  2:760361/1‑141 (MQ=255)                                                                                                            gCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTaaa                                    >  1:527540/1‑140 (MQ=255)                                                                                                             cTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTaaca                                   >  1:66708/1‑141 (MQ=255)                                                                                                              ttCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTTCAAATCGTTTaacaa                                  >  2:3357/1‑141 (MQ=255)                                                                                                              ttCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTaacaa                                  >  2:94594/1‑141 (MQ=255)                                                                                                              ttCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTaacaa                                  >  1:219360/1‑141 (MQ=255)                                                                                                                 atatAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTTTTTTTCTTTTCGTTTAACAACGt                               >  2:344759/1‑141 (MQ=255)                                                                                                                   gtaAAGGTCGAGTCGATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTAGAATAGTTTTTCTATTTCTCTTTCGATTTGACCAGGTTTTTTTTGAGGTGCAAATCGTTTAACAACGTTa                             <  2:691249/140‑1 (MQ=255)                                                                                                                       aGGTCGAGTCAATATATGATACGActttatatgaagcgtttttattacaaacattcctctattgtatcttgtcatttgaacatcatttaattgatgtcacatatgactttatttctatatctatttatcatacttcaaacg                         <  2:344035‑M2/141‑118 (MQ=255)                                                                                                                       aGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTAACACCGTTACCtt                         <  2:405932/141‑1 (MQ=255)                                                                                                                       aGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTAACAACGTTACCtt                         <  1:764234/141‑1 (MQ=255)                                                                                                                        ggTTGAGTCTATATATGATTCAAGTTTATATGATGAGTTTTATTTGCTATGGGCTCGTATATTTTCTATTAGTGTTGCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTCTGGTGCAATTCGTTTACCATCGTTACCTTc                        <  2:157057/141‑1 (MQ=255)                                                                                                                           cGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTAACAACGTTACCTTcgcg                     >  2:289921/1‑141 (MQ=255)                                                                                                                            gAGTCAATATATGATACGActttatatgaagcgtttttattacaaacattcctctattgtatcttgt                                                                                              >  1:101508‑M2/1‑19 (MQ=255)                                                                                                                            gAGTCAATATATGATACGActttatatgaagcgtttttattacaaacattcctctattgtatcttgt                                                                                              <  2:101508‑M2/67‑49 (MQ=255)                                                                                                                            gAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTAACAACGTTACCTTCGCGa                    >  2:225143/1‑141 (MQ=255)                                                                                                                            gAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTAACAACGTTACCTTCGCGa                    >  2:710946/1‑141 (MQ=255)                                                                                                                            gAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTAACAACGTTACCTTCGCGa                    >  1:325367/1‑141 (MQ=255)                                                                                                                              gTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTTAGTTGCAAATCGTTTAACAACGTTACCTTCGCGATc                  >  2:761268/1‑141 (MQ=255)                                                                                                                               tCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTAACAACGTTACCTTCGCGATcc                 <  1:494218/141‑1 (MQ=255)                                                                                                                                 aaTATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTAACAACGTTACCTTCGCGATCCAc               >  1:455200/1‑141 (MQ=255)                                                                                                                                            cGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTAACAACGTTACCTTCGCGATCCACTAAAAACTTAg    >  2:479501/1‑141 (MQ=255)                                                                                                                                              aCTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTAACAACGTTACCTTCGCGATCCACTAAAAACTTAGTg  >  2:597191/1‑141 (MQ=255)                                                                                                                                              |                                                                                                                                             AACGTTTGAAGTATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGT‑TCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAACGCTTCATATAAAGGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATTTTTCTATTTCTCTTTCGATTTGAACAGGTTTTTTTTGAGGTGCAAATCGTTTAACAACGTTACCTTCGCGATCCACTAAAAACTTAGTG  >  CP000730/1332831‑1333111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.