New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2207748 =	67 (1.030)	4 (0.070)	4/236	NT	6.3%	intergenic (+109/+155)	rodA/USA300HOU_2080	FtsW/RodA/SpoVE family cell division protein/hypothetical protein
	?	CP000730	2207798 =	57 (0.960)					intergenic (+159/+105)	rodA/USA300HOU_2080	FtsW/RodA/SpoVE family cell division protein/hypothetical protein

TCAAATATCATAACTTTTCAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGTGACTTACTTTATTAGATGCTG  >  CP000730/2207658‑2207937                                                                                                                                             |                                                                                                                                            tCAAATATCATAACTTTTCAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGAttt                                                                                                                                             >  1:714489/1‑141 (MQ=255)        tCATAACTTTTCAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTtata                                                                                                                                      >  1:394584/1‑141 (MQ=255)         cATAACTTTTCAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATAGAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTtatat                                                                                                                                     <  1:50497/141‑1 (MQ=255)            aaCTTTTCAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGt                                                                                                                                  >  2:385847/1‑141 (MQ=255)             aCTTTTCAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTa                                                                                                                                 >  2:120708/1‑141 (MQ=255)               ttttCAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACt                                                                                                                               <  1:456344/141‑1 (MQ=255)               ttttCAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACt                                                                                                                               <  1:520046/141‑1 (MQ=255)                tttCAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACtt                                                                                                                              >  2:666526/1‑141 (MQ=255)                 ttCAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTACAGAGGGATTTTGCTATATAGTACTTg                                                                                                                             >  2:192080/1‑141 (MQ=255)                 ttCAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTg                                                                                                                             <  1:100697/141‑1 (MQ=255)                   cAAGATGACGTTATATNGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCt                                                                                                                           >  1:633951/1‑141 (MQ=255)                   cAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCt                                                                                                                           >  1:348965/1‑141 (MQ=255)                     aGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCttt                                                                                                                         >  2:638932/1‑141 (MQ=255)                          aCGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCAttt                                                                                                                    >  2:671810/1‑141 (MQ=255)                           cGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCAtttt                                                                                                                   <  1:37814/141‑1 (MQ=255)                                 ataGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTaaa                                                                                                             <  1:686188/141‑1 (MQ=255)                                     tCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCa                                                                                                         >  2:376854/1‑141 (MQ=255)                                      cTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAg                                                                                                        <  1:348214/141‑1 (MQ=255)                                      cTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAg                                                                                                        <  1:87692/141‑1 (MQ=255)                                      cTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAg                                                                                                        >  1:60848/1‑141 (MQ=255)                                        aTTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTc                                                                                                      >  1:714788/1‑141 (MQ=255)                                         tttACGTCGTCAATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATTTACACTCTAAAGATTGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCa                                                                                                     <  2:115988/141‑1 (MQ=255)                                            aCGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCaaaa                                                                                                  >  2:174440/1‑141 (MQ=255)                                              gtcgtcGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCaaaaaa                                                                                                >  1:418331/1‑141 (MQ=255)                                                cgtcgATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAGACCAGTCAAAAAAGc                                                                                              >  1:241543/1‑141 (MQ=255)                                                  tcgATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTa                                                                                            >  1:46251/1‑141 (MQ=255)                                                               tCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTc                                                                               <  1:647821/141‑1 (MQ=255)                                                               tCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTc                                                                               >  1:165125/1‑141 (MQ=255)                                                                cATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTcc                                                                              <  2:628318/141‑1 (MQ=255)                                                                 atatatAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCcg                                                                             <  1:238553/141‑1 (MQ=255)                                                                   atataGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCcgac                                                                           >  1:635532/1‑141 (MQ=255)                                                                    tataGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCcgacg                                                                          >  1:513119/1‑141 (MQ=255)                                                                    tataGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCcgacg                                                                          >  2:247768/1‑141 (MQ=255)                                                                     ataGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCcgacga                                                                         <  1:192080/141‑1 (MQ=255)                                                                     ataGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTAAAAAAAGCTATCATCGAATAGTCcgacga                                                                         <  2:88067/141‑1 (MQ=255)                                                                           atTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTc                                                                                                      >  2:501909/1‑106 (MQ=255)                                                                           atTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTc                                                                                                      <  1:501909/106‑1 (MQ=255)                                                                           atTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCtt                                                                   <  1:138596/141‑1 (MQ=255)                                                                              aCTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGCTTGCTTTaa                                                                >  2:703618/1‑141 (MQ=255)                                                                                 cGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACgg                                                             <  2:477296/141‑1 (MQ=255)                                                                                 cGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACgg                                                             >  1:390471/1‑141 (MQ=255)                                                                                    taataaCAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTCAAGAGGGCTTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGgtgt                                                          >  2:510850/1‑141 (MQ=255)                                                                                    taataaCAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGgtgt                                                          >  1:286086/1‑141 (MQ=255)                                                                                    taataaCAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGgtgt                                                          <  1:724526/141‑1 (MQ=255)                                                                                         aCAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGAt                                                     >  1:476728/1‑141 (MQ=255)                                                                                           AATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTc                                                   <  1:668980‑M1/141‑1 (MQ=255)                                                                                            ATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTca                                                  <  2:54226‑M1/141‑1 (MQ=255)                                                                                                ctctttagagtgtacattttacaatgtgtacttcaaagagggattTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAAt                                              >  1:125257‑M2/46‑141 (MQ=255)                                                                                                 tctttagagtgtacattttacaatgtgtacttcaaagagggattTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATc                                             >  1:71915‑M2/45‑141 (MQ=255)                                                                                                 TCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATc                                             <  1:288558‑M1/141‑1 (MQ=255)                                                                                                    ttagagtgtacattttacaatgtgtacttcaaagagggattTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTatca                                                                                         >  1:337140‑M2/42‑94 (MQ=255)                                                                                                    ttagagtgtacattttacaatgtgtacttcaaagagggattTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTatca                                                                                         <  2:337140‑M2/53‑1 (MQ=255)                                                                                                     TGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAacggtgtgtgattgtgaatcacac                                         >  2:367247‑M1/1‑130 (MQ=255)                                                                                                         gTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCaa                                     >  2:276294/1‑141 (MQ=255)                                                                                                         gTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCaa                                     >  1:11309/1‑141 (MQ=255)                                                                                                              caTTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAattatt                                <  2:480341/141‑1 (MQ=255)                                                                                                                ttGTAAANTGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAAACCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTAtttt                              <  2:590543/141‑1 (MQ=255)                                                                                                                 tGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTa                             >  1:531290/1‑141 (MQ=255)                                                                                                                     aaaTGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTc                         >  2:92693/1‑141 (MQ=255)                                                                                                                     aaaTGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTc                         >  1:300231/1‑141 (MQ=255)                                                                                                                       aTGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGt                       <  2:603178/141‑1 (MQ=255)                                                                                                                        tGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGTg                      >  1:46310/1‑141 (MQ=255)                                                                                                                         gTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAat                                    <  1:723301/126‑1 (MQ=255)                                                                                                                         gTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAat                                    >  2:723301/1‑126 (MQ=255)                                                                                                                          tACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGTGac                    <  2:416294/141‑1 (MQ=255)                                                                                                                           acacTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGTGact                   <  1:718627/141‑1 (MQ=255)                                                                                                                                  aaagagggattTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGTGACTTACTtta            >  2:177728‑M2/12‑141 (MQ=255)                                                                                                                                    agagggattTTGTTATATAGTACTTGCTTTCATTTTAGTTAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGTGACTTACTttatt          <  1:604559‑M2/132‑1 (MQ=255)                                                                                                                                           ttTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGTGACTTACTTTATTAGATGCt   >  2:608758‑M2/3‑141 (MQ=255)                                                                                                                                           ttTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGTGACTTACTTTATTAGATGCt   >  1:711070‑M2/3‑141 (MQ=255)                                                                                                                                           ttTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGTGACTTACTTTATTAGATGCt   >  2:205533‑M2/3‑141 (MQ=255)                                                                                                                                            tTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGTGACTTACTTTATTAGATGCTg  <  1:183220‑M2/140‑1 (MQ=255)                                                                                                                                            tTTGCTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGTGACTTACTTTATTAGATGCTg  >  2:132404‑M2/2‑141 (MQ=255)                                                                                                                                             |                                                                                                                                            TCAAATATCATAACTTTTCAAGATGACGTTATATAGTCTATTTACGTCGTCGATTTAAAATGTCATATATAGATATTACTCGATAATAACAATCCCTCTTTGAAGTACACATTGTAAAATGTACACTCTAAAGAGGGATTTTGTTATATAGTACTTGCTTTCATTTTAGTAAATCCAGTCAAAAAAGCTATCATCGAATAGTCCGACGATAGCTTTAACGGTGTGTGATTCACAATCACAGTCAATTATTTTAATTCGTGACTTACTTTATTAGATGCTG  >  CP000730/2207658‑2207937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.