New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2484170	79 (1.210)	7 (0.120)	5/230	NT	8.6%	intergenic (+32/+34)	USA300HOU_2347/mqo	hypothetical membrane protein/malate dehydrogenase (acceptor)
	?	CP000730	= 2484183	79 (1.360)					intergenic (+45/+21)	USA300HOU_2347/mqo	hypothetical membrane protein/malate dehydrogenase (acceptor)

TTCATTGTGGTTTATGTATTAATTTGGATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTGGTTCCCATCCTT  >  CP000730/2484043‑2484322                                                                                                                                             |                                                                                                                                            ttCATTGTTGTTTATGTATTAATTTGGATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTaaaaa                                                                                                                                             >  1:463268/1‑141 (MQ=255) ttCATTGTGGTTTATGTATTAATTTGGATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTaaaaa                                                                                                                                             >  1:94542/1‑141 (MQ=255) ttCATTGTGGTTTATGTATTAATTTGGATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTaaaaa                                                                                                                                             >  1:684181/1‑141 (MQ=255)   cATTGTGGCTTATGTATTAATTTGGATAATTCAATTCTTTAAAAACAGGCACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGAGTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAag                                                                                                                                           <  2:605603‑M2/141‑3 (MQ=255)     ttGTGGTTTATGTATTAATTTGGATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAagac                                                                                                                                         <  2:126126‑M2/141‑5 (MQ=255)             tATGTATTAATTTGGATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAagacattaccgt                                                                                                                                 >  2:782201‑M2/1‑129 (MQ=255)                  aTTAATTTGGATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACcgtttcgt                                                                                                                            <  1:151257/141‑1 (MQ=255)                    tAATTTGGATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACcgtttcgttt                                                                                                                          <  1:345357/141‑1 (MQ=255)                     aaTTTGGATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAACACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTtta                                                                                                                         <  2:147672/141‑1 (MQ=255)                          ggATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTCAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTattatt                                                                                                                    <  1:276201/141‑1 (MQ=255)                          ggATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTattatt                                                                                                                    >  1:242485/1‑141 (MQ=255)                          ggATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTattatt                                                                                                                    <  1:458328/141‑1 (MQ=255)                          ggATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCCTTTattatt                                                                                                                    <  1:689664/141‑1 (MQ=255)                            aTAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTa                                                                                                                  >  1:285036/1‑141 (MQ=255)                               attcaattcTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACt                                                                                                               <  1:326836/141‑1 (MQ=255)                               attcaatgcTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACt                                                                                                               >  1:621968/1‑141 (MQ=255)                                    attcTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTaa                                                                                                          <  2:398331/141‑1 (MQ=255)                                     ttcTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTaaa                                                                                                         >  1:668517/1‑141 (MQ=255)                                         ctAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACt                                                                                                     >  1:166967/2‑141 (MQ=255)                                          tAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACTACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAATTTCTAAATACtt                                                                                                    >  2:152017/1‑141 (MQ=255)                                          tAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACtt                                                                                                    <  2:229134/141‑1 (MQ=255)                                            aaagaaaGAACTACGTAGACACTATTAACAAGAAACTGAAACAATTAAAATGATTTTTATAAAAAAAAAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAg                                                                                                  <  2:91194/136‑1 (MQ=255)                                            aaaaCAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAg                                                                                                  >  1:450392/1‑141 (MQ=255)                                             aaaCAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGt                                                                                                 <  1:671634/141‑1 (MQ=255)                                              aaCAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAagacattaccgttttttagtgattaataaaaaaaattttaattct                                                                                                <  2:611425‑M2/141‑46 (MQ=255)                                              aaCAAGAACTAAGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTGTTATTAAGAACTAAAAAACGGAAGTGTGTATCGTATTAAAAAagacattaccgttttttagtgggtaataaaaagaattttaaatgt                                                                                                <  2:611282‑M2/141‑46 (MQ=255)                                                 aaGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTAct                                                                                             >  1:675609/1‑141 (MQ=255)                                                  aGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTCCATACTTAGTTActt                                                                                            >  1:51259/1‑141 (MQ=255)                                                   gAACTACGTAGACACTATTAACAAGCAACTGAAACAATTACAATGATTTTTATTAACCAATCAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTCTTATTTCACTTCTAAATCATTAGTTActtc                                                                                           >  2:194838/1‑141 (MQ=255)                                                    aaCTACGTAGACATTATTTATTAGCAATTGATATAATTAAAATGATTTTTATTAAACACTAATAAACGGTAATGTCTATCACATTAAAAAAGACATTACTGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTActtct                                                                                          <  2:679463/141‑1 (MQ=255)                                                       tACGTAGGCTCGATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTGCCGTTGCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCa                                                                                       <  2:466767/141‑1 (MQ=255)                                                       tACATAGACACTATTAACAAGAAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTAAAAAAAAAAAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCa                                                                                       <  2:117684/141‑1 (MQ=255)                                                        aCGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCAt                                                                                      <  2:396488/141‑1 (MQ=255)                                                        aCGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCAt                                                                                      <  1:354510/141‑1 (MQ=255)                                                        aCGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCAt                                                                                      <  1:66518/141‑1 (MQ=255)                                                         cGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACCAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCAtt                                                                                     >  2:748195/1‑141 (MQ=255)                                                               cacTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAAtttt                                                                               <  2:776718/141‑1 (MQ=255)                                                               cacTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAAtttt                                                                               >  1:763346/1‑141 (MQ=255)                                                                acTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGATACTTCTTCATTAATTTTa                                                                              >  2:695068/1‑141 (MQ=255)                                                                 cTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTAt                                                                             <  2:74089/141‑1 (MQ=255)                                                                     tAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGata                                                                         <  1:583952/141‑1 (MQ=255)                                                                      aaCAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGatat                                                                        >  1:189146/1‑141 (MQ=255)                                                                       acatgtaaCTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAGGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGAtata                                                                       <  2:740370/135‑1 (MQ=255)                                                                            cAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATcc                                                                  <  2:119046/141‑1 (MQ=255)                                                                             aaCTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCt                                                                 <  1:240109/141‑1 (MQ=255)                                                                              aCTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTc                                                                >  1:625390/1‑141 (MQ=255)                                                                                tGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCAt                                                              <  1:289387/141‑1 (MQ=255)                                                                                  aaaCAATTAAAATGATTTTTTTTTTTTTTTTAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCTTTATGa                                                            >  2:494935/1‑141 (MQ=255)                                                                                  aaaCAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGa                                                            <  1:282981/141‑1 (MQ=255)                                                                                  aaaCAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGa                                                            >  2:147439/1‑141 (MQ=255)                                                                                  aaaCAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGa                                                            >  2:499853/1‑141 (MQ=255)                                                                                    aCAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTCTTTAACTTGTAAATACTAAGTTACTTCTTCATTAATTTTATCATATAAATCCTCATGATc                                                          >  2:669104/1‑141 (MQ=255)                                                                                    aCAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATc                                                          >  1:634986/1‑141 (MQ=255)                                                                                         tAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTa                                                     <  2:177387/141‑1 (MQ=255)                                                                                         tAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTa                                                     >  1:452037/1‑141 (MQ=255)                                                                                          aaaaTGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTaa                                                    <  1:732623/141‑1 (MQ=255)                                                                                           aaaTGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATAATTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCCTGATCTGTTAAg                                                   >  1:158812/1‑141 (MQ=255)                                                                                                 tttttATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATaa                                             >  1:479477/1‑141 (MQ=255)                                                                                                   tttATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAAcc                                           <  1:666069/141‑1 (MQ=255)                                                                                                    ttattaACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCa                                          >  2:400512/1‑141 (MQ=255)                                                                                                          aCCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGAc                                    >  2:117970/1‑141 (MQ=255)                                                                                                           ccACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACg                                   <  1:679989/141‑1 (MQ=255)                                                                                                            cACTAAANAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTGAAGCGATAACCAAATGACgg                                  <  2:590329/141‑1 (MQ=255)                                                                                                             aCTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCt                                                         <  2:382260/117‑1 (MQ=255)                                                                                                             aCTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCt                                                         >  1:382260/1‑117 (MQ=255)                                                                                                                aaaaaaCGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCAcc                              >  2:530746/1‑141 (MQ=255)                                                                                                                aaaaaaCGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCAcc                              >  1:700869/1‑141 (MQ=255)                                                                                                                 aaaaaCGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCTTGATCTGTTAAGCGATAACCAAATGACGGCACCa                             <  2:286621/141‑1 (MQ=255)                                                                                                                 aaaaaCGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCa                             >  1:252047/1‑141 (MQ=255)                                                                                                                   aaaCGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCAtt                           <  1:501995/141‑1 (MQ=255)                                                                                                                     aCGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTc                         <  1:322365/141‑1 (MQ=255)                                                                                                                     aCGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTc                         >  1:355025/1‑141 (MQ=255)                                                                                                                      cGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGTGATAACCAAATGACGGCACCATTTCt                        <  1:386875/141‑1 (MQ=255)                                                                                                                      cGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCt                        >  1:420368/1‑141 (MQ=255)                                                                                                                       ggTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCtt                       >  2:728459/1‑141 (MQ=255)                                                                                                                        gTAATGTCTATCACATTAAAAAagacattaccgttttttagtggttaataaaaatcattttaattgtttca                                                                                            >  1:332335‑M2/1‑22 (MQ=255)                                                                                                                        gTAATGTCTATCACATTAAAAAagacattaccgttttttagtggttaataaaaatcattttaattgtttca                                                                                            <  2:332335‑M2/71‑50 (MQ=255)                                                                                                                          aaTGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTaa                    >  1:34911/1‑141 (MQ=255)                                                                                                                           aTGTCTTTCACATTAAAAAAGACATTTCCGTTTCTTTTATTATTTAACTTGTAAATACTTACTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAAt                   <  1:669273/141‑1 (MQ=255)                                                                                                                             gTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCt                 <  2:158812/141‑1 (MQ=255)                                                                                                                             gTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCt                 >  1:645882/1‑141 (MQ=255)                                                                                                                              tCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCtt                <  2:621968/141‑1 (MQ=255)                                                                                                                                tATCACATTAAAAAagacattaccgttttttagtggttaataaaaatcattttaattgtttcagttgcttgttaatagtgtctacgtagttcttgtttttaaagaattgaattatccaaattaatacataaaccacaatga              <  2:684520‑M2/141‑128 (MQ=255)                                                                                                                                tATCACATTAAAAAagacattaccgttttttagtggttaataaaaatcattttaattgtttcagttgcttgttaatagtgtctacgtagttcttgtttttaaagaagtgaattatccaaattaatacataaaccacaatga              <  1:727035‑M2/141‑128 (MQ=255)                                                                                                                                tATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAGTCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTg              >  1:96323/1‑141 (MQ=255)                                                                                                                                tATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTg              <  1:260299/141‑1 (MQ=255)                                                                                                                                 aTCACATTAAAAAagacattaccgttttttagtggttaataaaaatcattttaattgtttcagttgcttgttaatagtgtctacgtagttcttgtttttaaagaattgaattatccaaattaatacataaaccacaatgaa             <  2:432325‑M2/141‑129 (MQ=255)                                                                                                                                 aTCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTgg             >  2:279577/1‑141 (MQ=255)                                                                                                                                  tCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTGGt            >  2:740046/1‑141 (MQ=255)                                                                                                                                    acaTTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACTAAATGACGGCACCATTTCTTTAATCTTTGGTTc          <  1:408224/141‑1 (MQ=255)                                                                                                                                    acaTTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTGGTTc          <  2:391057/141‑1 (MQ=255)                                                                                                                                    acaTTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATCATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTGGTTc          <  2:492166/141‑1 (MQ=255)                                                                                                                                     caTGAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATGTAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTGGTTcc         <  2:128773/141‑1 (MQ=255)                                                                                                                                       ttAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTGGTTCCCa       <  2:94542/141‑1 (MQ=255)                                                                                                                                         aaaaaaGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTGGTTCCCATc     >  2:144619/1‑141 (MQ=255)                                                                                                                                          aaaaaGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTGGTTCCCATcc    <  2:627350/141‑1 (MQ=255)                                                                                                                                            aaaGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTGGTTCCCATCCtt  <  1:478197/141‑1 (MQ=255)                                                                                                                                            aaaGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTGGTTCCCATCCtt  <  2:147547/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                            TTCATTGTGGTTTATGTATTAATTTGGATAATTCAATTCTTTAAAAACAAGAACTACGTAGACACTATTAACAAGCAACTGAAACAATTAAAATGATTTTTATTAACCACTAAAAAACGGTAATGTCTATCACATTAAAAAAGACATTACCGTTTCGTTTATTATTTAACTTGTAAATACTTAGTTACTTCTTCATTAATTTTATGATATAAATCCTCATGATCTGTTAAGCGATAACCAAATGACGGCACCATTTCTTTAATCTTTGGTTCCCATCCTT  >  CP000730/2484043‑2484322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.