New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 80275719 (0.690)3 (0.120) 3/244 NT 15.0% coding (544/918 nt) dgkA1 possible diacylglycerol kinase
?CP000730 = 802799 16 (0.610)coding (502/918 nt) dgkA1 possible diacylglycerol kinase

AATGAAAGTGTTCAGTTCACCATCTTGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/802611‑802757
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaattgAGTTATATTGGATCAACTGTCAAAACACTGCTAAATCCAACACAATTTAATTATCAATTATCAATAGATGATAAGACATATTCTGGCGAAACGACCATGATACTAACAGCAAATGGTCCATTCATTGGTGGTAGTCG  <  CP000730/802799‑802663
                                                                                                                                                                                                                                                                                            
AATGAAAGTGTTCAGTTCACCATCTTGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGCCTTATCATCTATTGATAATTGATAATT                                                                                                                                                 <  2:126083/141‑1
    AAAGTGTTCAGTTCACCATCTTGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAGTGAATGGACCATTTGCTGTTAGTATCATGGTCGGTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAAT                                                                                                                                             >  2:112538/1‑141
     AAGTGTTCAGTTCACCATCTTGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATT                                                                                                                                            >  2:117857/1‑141
                                          CAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTG‑‑‑‑‑TGTTGGATCAACTGTCAAAACACTGCTAAATCCAAC                                                                                                  <  2:181218/141‑1
                                                       CTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGAGTTATATTGGATCAACTGTCAAAACACTGCTAAATCCAACACAATTTA                                                                                          <  1:140044/141‑1
                                                               AATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGAGTTATATTGGATCAACTGTCAAAACACTGCTAAATCCAACACAATTTAATTATCAA                                                                                  <  2:287233/141‑1
                                                                                                                                              AATTGAGTTATATTGGATCAACTGTCAAAACACTGCTAAATCCAACACAATTTAATTATCAATTATCAATAGATGATAAGACATATTCTGGCGAAACGACCATGATACTAACAGCAAATGGTCCATTCATTGGTGGTAGTC   <  2:315116/141‑1
                                                                                                                                               ATTGAGTTATATTGGATCAACTGTCAAAACACTGCTAAATCCAACACAATTTAATTATCAATTATCAATAGATGATAAGACATATTCTGGCGAAACGACCATGATACTAACAGCAAATGGTACATTCATTGGTGGTAGTCG  <  2:7610/141‑1
                                                                                                                                                                                                                                                                                            
AATGAAAGTGTTCAGTTCACCATCTTGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/802611‑802757
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaattgAGTTATATTGGATCAACTGTCAAAACACTGCTAAATCCAACACAATTTAATTATCAATTATCAATAGATGATAAGACATATTCTGGCGAAACGACCATGATACTAACAGCAAATGGTCCATTCATTGGTGGTAGTCG  <  CP000730/802799‑802663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.