New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 802757	19 (0.690)	3 (0.120)	3/244	NT	15.0%	coding (544/918 nt)	dgkA1	possible diacylglycerol kinase
	?	CP000730	= 802799	16 (0.610)					coding (502/918 nt)	dgkA1	possible diacylglycerol kinase

GTGTTCAGTTCACCATCTTGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTCAATTTACCAAATATATCTTTTGAACCATCTTGTACGTTTTCAGCGTTTTGAACAATGAGACCTAAGCCAACAAAGTTGAGTGCATATTGATTATTTA  >  CP000730/802618‑802897                                                                                                                                            |                                                                                                                                             gtgtTCAGTTCACCATCTTGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATtgt                                                                                                                                             >  1:81416/1‑141 (MQ=255)       agttcaCCATCTTGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGa                                                                                                                                       <  2:127754/141‑1 (MQ=255)            aCCATCTTGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAg                                                                                                                                  <  1:76905/141‑1 (MQ=255)            aCCATCTTGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAg                                                                                                                                  <  1:90565/141‑1 (MQ=255)            aCCATCTTGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAg                                                                                                                                  <  1:297522/141‑1 (MQ=255)                  ttGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATCGCTCATCGATAATTAAATTGTGTTGGATTTAGCAgtgt                                                                                                                            <  2:14824/141‑1 (MQ=255)                              aTCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGa                                                                                                                >  2:157764/1‑141 (MQ=255)                                cAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATc                                                                                                              >  1:218888/1‑141 (MQ=255)                                   tCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCaa                                                                                                           >  1:167367/1‑141 (MQ=255)                                    cAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGtgttggatcaactgtcaaaacactgctaaatccaac                                                                                                          <  2:181218‑M1/141‑37 (MQ=255)                                     aaTGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAata                                                                                                         >  1:274778/1‑141 (MQ=255)                                              cGACTACCACCAATGATTGGACCATATGCTGTTAGTATCATGGTCATTTCGTCAGAATATGTTTTATCACCTATTGATAATTTATATATAAGTTTTGTTGGATTTAGCAGTGATTTGACAGTTTATCGAAAATAATTTAAt                                                                                                >  2:7263/1‑141 (MQ=255)                                              cGACTACCACCAATGAATGTACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTcaat                                                                                                <  2:7610‑M2/141‑5 (MQ=255)                                               gACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTcaatt                                                                                               <  2:315116‑M2/141‑6 (MQ=255)                                                 cTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGagttatattggatcaactgtcaaaacactgctaaatccaacacaattta                                                                                             <  1:140044‑M1/141‑50 (MQ=255)                                                         aatgaatgGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGagttatattggatcaactgtcaaaacactgctaaatccaacacaatttaattatcaa                                                                                     <  2:287233‑M1/141‑58 (MQ=255)                                                              atgGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTCAATTTACCAAATATATCtt                                                                                >  1:305669/1‑141 (MQ=255)                                                                         gCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTCAATTTACCAAATATATCTTTTGAACCATCt                                                                     >  2:25956/1‑141 (MQ=255)                                                                                            tttCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTCAATTTACCAAATATATCTTTTGAACCATCTTGTACGTTTTCAGCGtttt                                                  >  2:69960/1‑141 (MQ=255)                                                                                            tttCGCCAGAATATGTCTTATCATCTATCGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTCAATTTACCAAATATATCTTTTGAACCATCTTGTACGTTTTCAGCGtttt                                                  <  1:326789/141‑1 (MQ=255)                                                                                                gCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTCAATTTACCAAATATATCTTTTGAACCATCTTCTACGTTCTAAGCGTTTTGAAc                                              >  2:299769/1‑141 (MQ=255)                                                                                                     aaTATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTCAATTTACCAAATATATCTTTTGAACCATCTTGTACGTTTTCAGCGTTTTGAACAATga                                         <  1:18984/141‑1 (MQ=255)                                                                                                                  atcTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTCAATTTACCAAATATATCTTTTGAACCATCTTGTACGTTTTCAGCGTTTTGAACAATGAGACCTAAGCcaac                            <  1:7610/141‑1 (MQ=255)                                                                                                                  atcTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTCAATTTACCAAATATATCTTTTGAACCATCTTGTACGTTTTCAGCGTTTTGAACAATGAGACCTAAGCcaac                            <  1:7263/141‑1 (MQ=255)                                                                                                                     tATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGTTCCAATATAACTCAATTTACCAAATATATCTTTTGAACCATCTTGTACGTTTTCAGCGTTTTGAACAATGAGACCTAAGCCAACaaa                         <  2:62613/141‑1 (MQ=255)                                                                                                                              ttgataattAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTcaatttaattatcaattatcaatagatgataagacatattctggcgaaacgaccatgatactaacagcaaatggtccattcatt                <  2:287233‑M2/141‑85 (MQ=255)                                                                                                                                      tAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTcaatttaattatcaattatcaatagatgataagacatattctggcgaaacgaccatgatactaacagcaaatggtccattcattggtggtag        <  1:140044‑M2/141‑93 (MQ=255)                                                                                                                                        aaTTGagttatattggatcaactgtcaaaacactgctaaatccaacacaatttaattatcaattatcaatagatgataagacatattctggcgaaacgaccatgatactaacagcaaatggtccattcattggtggtagtc      <  2:315116‑M1/141‑137 (MQ=255)                                                                                                                                         aTTGagttatattggatcaactgtcaaaacactgctaaatccaacacaatttaattatcaattatcaatagatgataagacatattctggcgaaacgaccatgatactaacagcaaatggtacattcattggtggtagtcg     <  2:7610‑M1/141‑138 (MQ=255)                                                                                                                                         aTTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTCAATTTACCAAATATATCTTTTGAACCATCTTGTACGTTTTCAGCGTTTTGAACAATGAGACCTAAGCCAACAAAGTTGAGTGCATATTGattat     >  1:136540/1‑141 (MQ=255)                                                                                                                                            gtgtTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTCAATTTACCAAATATATCTTTTGAACCATCTTGTACGTTTTCAGCGTTTTGAACAATGAGACCTAAGCCAACAAAGTTGAGTGCATATTGAttattta  <  1:117857/141‑1 (MQ=255)                                                                                                                                            |                                                                                                                                             GTGTTCAGTTCACCATCTTGAGGAGACAAATCAGTCAATGGTATACGACTACCACCAATGAATGGACCATTTGCTGTTAGTATCATGGTCGTTTCGCCAGAATATGTCTTATCATCTATTGATAATTGATAATTAAATTGTGTTGGATTTAGCAGTGTTTTGACAGTTGATCCAATATAACTCAATTTACCAAATATATCTTTTGAACCATCTTGTACGTTTTCAGCGTTTTGAACAATGAGACCTAAGCCAACAAAGTTGAGTGCATATTGATTATTTA  >  CP000730/802618‑802897

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.