New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2066558	30 (1.090)	3 (0.110)	3/248	NT	9.3%	coding (214/561 nt)	pncA	nicotinamidase
	?	CP000730	= 2066576	30 (1.130)					coding (232/561 nt)	pncA	nicotinamidase

ATATTGAAGATTTTATTGTTTCTCGTATCAATGACTTTAATTATTATCAAGACCATATATTCTTTTTAATGGATTTACATTATTTACATGACATTCATCATCCTGAAAGTAAATTATTCCCACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/2066433‑2066558 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accacTTGTATCTACGATATTGTGTGGTG  <  CP000730/2066576‑2066553                                                                                                                                                        agATTGAATATTTTATTGTTTCTCGTATCAATGACTTTAATTATTATCAAGACCATATATTCTTTTTAATGGAGTTACATTATTTACATGACATTCATCATCCTGAAAGTAAATTATTCCCACCCCTTGTATCTACGATAT           <  2:260414/139‑1                                                                    AATGGATTTACATTATTTACATGACATTCATCATCCTGAAAGTAAATTATTCCCACCACTTGTATCTACGATATTGTGTGGTG  <  1:331984/83‑1                                                                    AATGGATTTACATTATTTACATGACATTCATCATCCTGAAAGTAAATTATTCCCACCACTTGTATCTACGATATTGTGTGGTG  >  2:331984/1‑83                                                                                       CATGACATTCATCATCCTGAAAGTAAATTATTCCCAC                             <  1:256502/37‑1                                                                                       CATGACATTCATCATCCTGAAAGTAAATTATTCCCAC                             >  2:256502/1‑37                                                                                                                                                        ATATTGAAGATTTTATTGTTTCTCGTATCAATGACTTTAATTATTATCAAGACCATATATTCTTTTTAATGGATTTACATTATTTACATGACATTCATCATCCTGAAAGTAAATTATTCCCACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/2066433‑2066558 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accacTTGTATCTACGATATTGTGTGGTG  <  CP000730/2066576‑2066553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.