New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2757417219 (1.280)6 (0.040) 6/550 20.8 2.8% intergenic (+17/+227) intA/yfjH CP4‑57 prophage; integrase/CP4‑57 prophage; uncharacterized protein
?NC_000913 = 2757421 208 (1.260)intergenic (+21/+223) intA/yfjH CP4‑57 prophage; integrase/CP4‑57 prophage; uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

GCCAAACAGTGAATGCAGCACTCAAGCGTGCTGGCTTAGGAGGTGTACTTGTTTCACACGGCTTGCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2757111‑2757417
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatcagcccagAGAGCTGGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAACGATGCTACCACTATCTGCTGCTTTTACGAGATCAGCCCACCATTGCATCATCGGACGACGTTGCTCAAGATAATCACTGCGGTTATAAGCGCGACGCACCTCATTTTTGTCTACATGAGCAAGCGCTGCTTCAATGACATCAGGTGGAAATCCTTCCTCATTGAGTGCCGTACTGGCGATAGAACGCAAGCCGTGTGAAACAAGTACACCTCCTAAGCCAGCACGCTTGAGTGCTGCA  <  NC_000913/2757421‑2757124
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
GCCAAACAGTGAATGCAGCACTCAAGCGTGCTGGCTTAGGAGGTGTACTTGTTTCACACGGCTTTCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGAAGGGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGGCGTCAGATGATGCAATGGTGGGCACATCTCGTAAAAGCAGCCGATAGTGGAAGAATTGTGTTAACTCTTTTGCCCAACATTCGTTTTTTCGGATAAAATATTTATtt                                                                                                                                                                                                                                                                                                                  >  2:1270385/1‑299
GCCAAACAGTGAATGCAGCACTCAAGCGTGCTGGCTTAGGAGGTGTACTTGTTTCACACGGCTTGCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGGGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCCCGTAAAAGCAGCCGATAGTGGGAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAATTTTTTATC                                                                                                                                                                                                                                                                                                                   >  2:1240246/1‑300
  CAAACAGTGAATGCAGCACTCAAGCGTGCTGGCTTAGGAGGTGTACTTGTTTCACACGGCTTGCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTTGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTAATTTGAGCAAAATTCGTCTTGTCGGATAAAATTTTTATCAGC                                                                                                                                                                                                                                                                                                                >  1:323443/1‑301
    AACAGTGAATGCAGCACTCAAGCGTGCTGGCTTAGGAGGTGTACTTGTTTCACACGGCTTGCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCC                                                                                                                                                                                                                                                                                                              <  1:1211006/301‑1
     ACAGTGAAGGCAGCACGCAAGCGTGCTGGCTTAGGAGGTGTACTTGTTTCACACGGCTTGCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCCA                                                                                                                                                                                                                                                                                                             <  1:1354863/301‑1
      CAGTGAATGCAGCACTCAAGCGTGCTGGCTTAGGAGGTGTACTTGTTTCACACGGCTTGCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCC                                                                                                                                                                                                                                                                                                              >  1:140886/1‑299
        cagatgtCAGCACTCTAGCTTGCTGGCTTAGGAGGTGTTCTTGTTTAACACCGCTTGCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCAACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCCAG                                                                                                                                                                                                                                                                                                            <  2:1379090/292‑1
               CAGCACTCAAGCGTGCTGGCTTAGGAGGTGTACTTGTTTCACACGGCTTGCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGGGCAAAATTCGTCTTGTCGGATAAAATATTTATAAGCCAAG                                                                                                                                                                                                                                                                                                            >  1:1379457/1‑292
                     acacgacgttcttcctctcttggGTACTTTATTCACAAGGCTTGCATTCGATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGCAACGCGTGCGAATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTAATGATCTTGAGCAGCGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGGAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCCAGAGAGCTGGGCTGA                                                                                                                                                                                                                                                                                               <  2:625997/276‑1
                                         GGTGTACTTGTTTCACACGGCTTGCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGCTCTCGTAAAAGCAGCAGCTCGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATATACTATTTATCAGCCCAGATGGCTGGGCTGAagctaggaagagaacacgtttg                                                                                                                                                                                                                                                                         >  1:626155/1‑279
                                                                                                AAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCCAGAGAGCTGGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAACGATGCTACCACTATCTGC                                                                                                                                                                                                                              <  1:1040983/289‑1
                                                                                                AAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCCAGAAAGCTGGGCTGATAAATATTTTATCCGAAAAGATGAATTTTGTTCAACTGAGTGAAAACGATGATACAACAATATGCagatagaaaa                                                                                                                                                                                                                    >  2:1040696/1‑289
                                                                                                                    ATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCC                                                                                                                                                                                                                                                                                                              <  1:72411/189‑1
                                                                                                                    ATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCC                                                                                                                                                                                                                                                                                                              >  2:72396/1‑189
                                                                                                                                                                                                            taCAATGGTGGGCTGATCTCGAAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCCAGAGAGCTGGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAAC                                                                                                                                                                                                                                                <  2:324193/161‑1
                                                                                                                                                                                                            TGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCCAGAGAGCTGGGCTGATAAATATTTTATCCGAAAAGACGAATTTTGCTCAAATGAGTTAAAAC                                                                                                                                                                                                                                                >  1:324274/1‑163
                                                                                                                                                                                                                                                                                                        TATCAGCCCAGAGAGCTGGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAACGATGCTACCACTATCTGCTGCTTTTACGAGATCAGCCCACCATTGCATCATCGGACGACGTTGCTCAAGATAATCACTGCGGTTATAAGCGCGACGCACCTCATTTTTGTCTACATGAGCAAGCGCTGCTTCAATGACATCAGGTGGAAATCCTTCCTCATTGAGTGCCGTACTGGCGATAGAACGCAAGCCGTGTGAAACA                                      <  1:23383/273‑1
                                                                                                                                                                                                                                                                                                        TATCAGCCCAGAGAGCTGGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAACGATGCTACCACTATCTGCTGCTTTTACGAGATCAGCCCACCATTGCATCATCGGACGACGTTGCTCAAGATAATCACTGCGGTTATAAGCGCGACGCACCTCATTTTTGTCTACATGAGCAAGCGCTGCTTCAATGACATCAGGTGGAAATCCTTCCTCATTGAGTGCCGTACTGGCGATAGAAAGCAAGCCGGGGGAAACAAGacgggaagagcgtcgggtagggaa            >  2:23382/1‑275
                                                                                                                                                                                                                                                                                                            AGCCCAGAGAGCTTGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAACGATGCTACCACTATCTGCTGCTTTTACGAGATCAGCCCACCATTGCATCATCGGACGACGTTGCTCAAGATAATCACTGCGGTTATAAGCGCGACGCACCTCATTTTTGTCTACATGAGCAAGCGCTGCTTCAATGACATCAGGTGGAAATCCTTCCTCATTGAGTGCCGTACTGGCGATAGAACGCAAGCCGTGTGAA                                         <  2:929302/266‑1
                                                                                                                                                                                                                                                                                                            AGCCCAGAGAGCTGGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAACGATGCTACCACTATCTGCTGCTTTTACGAGATCAGCCCACCATTGCATCATCGGACGACGTTGCTCAAGATAATCACTGCGGTTATAAGCGCGACGCACCTCATTTTTGTCTACATGAGCAAGCGCTGCTTCAATGACATCAGGTGGAAATCCTTCCTCATTGAGTGCCGTACTGGCGATAGACCGCAAGCCGTGTGAA                                         >  1:929555/1‑266
                                                                                                                                                                                                                                                                                                             GCCCAGAGAGCTGGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAACGATGCTACCACTATCTGCTGCTTTTACGAGATCAGCCCACCATTGCATCATCGGACGACGTTGCTCAAGATAATCACTGCGGTTATAAGCGCGACGCACCTCATTTTTGTCTACATGAGCAAGCGCTGCTTCAATGACATC                                                                                                   <  1:3897/207‑1
                                                                                                                                                                                                                                                                                                             GCCCAGAGAGCTGGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAACGATGCTACCACTATCTGCTGCTTTTACGAGATCAGCCCACCATTGCATCATCGGACGACGTTGCTCAAGATAATCACTGCGGTTATAAGCGCGACGCACCTCATTTTTGTCTACATGAGCAAGCGCTGCTTCAATGACATC                                                                                                   >  2:3896/1‑207
                                                                                                                                                                                                                                                                                                               CCAGAGAGCTGGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAACGATGCTACCACTATCTGCTGCTTTTACGAGATCGGCCCACCATTGCATCATCGGACGACGTTGCTCAAGATAATCACTGCGGTTATAAGCGCGACGCACCTCATTTTTGTCTACATGAGCAAGCGCTGCTTCAATGACATCAGGTGGAACTCCTTCCTCATTGAGTGCCGTACTGGCGATAGAACGCAATCCGTGTGAAAAAAGTACACCTCCTAACACAGCACGCTTGAGTGCTGC   >  2:1389977/1‑301
                                                                                                                                                                                                                                                                                                               CCAGAGAGCTGGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAACGATGCTACCACTATCTGCTGCTTTTACGAGATCAGCCCACCATTGCATCATCGGACGACGTTGCTCAAGATAATCACTGCGGTGATAAGCGCGACGCACCTCATTTTTGTCTACATGAGCAAGCGCTGCTTCAATGCCATCCGGTGGAAATCCTTCCTCATTGCGTGCCGAACTGGCGATAGAACGCAAGCCGTGCGAAACAAGTACACCTCCTAAGCCAGCACGCTGGAGTGCTGg   >  2:447744/1‑300
                                                                                                                                                                                                                                                                                                                CAGAGAGCTGGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAACGATGCTACCACTATCTGCTGCTTTTACGAGATCAGCCCACCATTGCATCATCGGACGACGTTGCTCAAGATAATCACTGCGGTTATAAGCGCGACGCACCTCATTTTTGTCTACATGAGCAAGCGCTGCTTCAATGACATCAGGTGGAAATCCTTCCTCATTGAGTGCCGTACTGGCGATAGAACGCAAGCCGTGTGAAACAAGTACACCTCCTAAGCCAGCACGCTTGAGTGCTGC   >  2:140857/1‑300
                                                                                                                                                                                                                                                                                                                CAGAGAGCGGTGCTTATAAATATTTTACCCGAAACGACCAAATTGGCCCCAAGTAGTTAAATCGTTTCTACCAGTATCTGCAGCTTTTACAAGATCCACCCACCATTGCATCATCGGACGACGTTGCTCAAGATAATAACGGCGGTTATAAGCGCTACGCGCCTCATTTTTGTCTACATGAGCAAGCGCTGCTTCAATGACATCAGGTGGAAATCCTTCCTCATTGAGTACCGTACTGGCGATAGAACGCAAGCCGTGTGAAACAAGTACACCTCCTAAGCCAGCACTCAAGCGTGCTGgc  <  2:419966/301‑3
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
GCCAAACAGTGAATGCAGCACTCAAGCGTGCTGGCTTAGGAGGTGTACTTGTTTCACACGGCTTGCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAAAATATTTATCAGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2757111‑2757417
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatcagcccagAGAGCTGGGCTGATAAATATTTTATCCGACAAGACGAATTTTGCTCAAATGAGTTAAAACGATGCTACCACTATCTGCTGCTTTTACGAGATCAGCCCACCATTGCATCATCGGACGACGTTGCTCAAGATAATCACTGCGGTTATAAGCGCGACGCACCTCATTTTTGTCTACATGAGCAAGCGCTGCTTCAATGACATCAGGTGGAAATCCTTCCTCATTGAGTGCCGTACTGGCGATAGAACGCAAGCCGTGTGAAACAAGTACACCTCCTAAGCCAGCACGCTTGAGTGCTGCA  <  NC_000913/2757421‑2757124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.