Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,199,680 IS1 (+) +8 bp coding (1120‑1127/1128 nt) intE ← e14 prophage; putative integrase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)118 (1.170) 101/298 0.0 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 1199680 = 0 (0.000)coding (1127/1128 nt) intE e14 prophage; putative integrase
* ? NC_000913 = 11996870 (0.000)92 (0.910) 79/298 0.3 100% coding (1120/1128 nt) intE e14 prophage; putative integrase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

CGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1199539‑1199687
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCT  <  NC_000913/1979270‑1979122
                                                                                                                                                                                                                                                                                                          
CGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGG                                                                                                                                                     >  1:1554619/1‑151
 GATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGG                                                                                                                                                     >  1:1498388/1‑150
       AGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCT                                                                                                                                              >  1:1426862/1‑151
        GGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTG                                                                                                                                             <  2:77847/151‑1
          TGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCC                                                                                                                                           >  1:1027212/1‑151
            ATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCA                                                                                                                                          >  2:290036/1‑150
             TCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAAC                                                                                                                                        >  1:37628/1‑151
             TCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAAC                                                                                                                                        >  1:712183/1‑151
                TCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAAC                                                                                                                                        <  2:840281/148‑1
                   CTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTA                                                                                                                                     <  2:1468664/148‑1
                    TGTGATATTTCACGTCTTACCAGTAACTGCTATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTG                                                                                                                                  >  1:1396896/1‑150
                     GTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACT                                                                                                                                   <  1:320411/148‑1
                     GTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACT                                                                                                                                   <  2:1359232/148‑1
                      TGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATT                                                                                                                               >  2:353611/1‑151
                        ATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTT                                                                                                                              >  2:1379556/1‑150
                           TTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTG                                                                                                                          >  2:1065866/1‑151
                               ACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATG                                                                                                                      <  2:1565213/151‑1
                               ACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATG                                                                                                                      >  1:528698/1‑151
                               ACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATG                                                                                                                      <  2:920207/151‑1
                                 GTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT                                                                                                                    <  2:446021/151‑1
                                 GTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT                                                                                                                    >  1:924874/1‑151
                                     TACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG                                                                                                                  <  1:1239037/149‑1
                                     TACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                                                                   <  2:734084/148‑1
                                     TACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                                                                   <  1:1062131/148‑1
                                     TACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                                                                   <  2:1252743/148‑1
                                      ACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGT                                                                                                               <  1:848559/151‑1
                                         AGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTT                                                                                                            >  2:1213010/1‑151
                                         AGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT                                                                                                             >  1:820680/1‑150
                                          GTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT                                                                                                           <  2:247702/151‑1
                                              CTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                                                                       >  1:363870/1‑151
                                               TGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                                                                       >  2:1161186/1‑150
                                                GATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG                                                                                                     <  2:1429679/151‑1
                                                GATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT                                                                                                      <  1:1102411/150‑1
                                                      GCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG                                                                                               <  1:125381/151‑1
                                                       CTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT                                                                                              >  2:1498334/1‑151
                                                               CGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG                                                                                      >  2:1314221/1‑151
                                                                  TCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT                                                                                   >  2:1517520/1‑151
                                                                   CGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT                                                                                   <  1:240007/150‑1
                                                                     CTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                                                                                 >  1:803946/1‑150
                                                                       TAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT                                                                               >  1:500792/1‑150
                                                                        AAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA                                                                             <  1:1311407/151‑1
                                                                        AAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATC                                                                              >  2:655739/1‑150
                                                                         AAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG                                                                            <  1:331553/151‑1
                                                                           GTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCT                                                                          >  2:483374/1‑151
                                                                              GACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                                                                       >  2:359857/1‑151
                                                                               ACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCC                                                                      >  2:288231/1‑151
                                                                               ACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCC                                                                      <  2:989042/151‑1
                                                                                CTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCC                                                                     >  2:1305663/1‑151
                                                                                CTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCC                                                                     >  2:210066/1‑151
                                                                                   TTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC                                                                  >  1:1352603/1‑151
                                                                                     TAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTG                                                                >  2:98333/1‑151
                                                                                          TTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC                                                             >  2:432071/1‑149
                                                                                           TTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAG                                                           <  1:499454/150‑1
                                                                                             ATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTA                                                        <  1:896434/151‑1
                                                                                               CATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACT                                                      <  2:76278/151‑1
                                                                                               CATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTAC                                                       <  1:1151193/150‑1
                                                                                               CATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTAC                                                       <  2:1027271/150‑1
                                                                                                ATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG                                                     >  2:794123/1‑151
                                                                                                  GTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAC                                                   <  2:776548/151‑1
                                                                                                  GTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA                                                    <  2:839299/150‑1
                                                                                                  GTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA                                                    <  1:1008887/150‑1
                                                                                                     CGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGG                                                <  2:169825/151‑1
                                                                                                     CGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGG                                                >  2:941024/1‑151
                                                                                                      GGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGG                                               >  2:180504/1‑151
                                                                                                         GAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGG                                            >  1:1169220/1‑151
                                                                                                         GAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGG                                            <  2:1100587/151‑1
                                                                                                         GAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGG                                            >  1:1318754/1‑151
                                                                                                            AAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGC                                         <  2:238205/151‑1
                                                                                                             AATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCG                                        <  1:1231386/151‑1
                                                                                                              ATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGT                                       <  1:165552/151‑1
                                                                                                              ATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGT                                       >  2:988228/1‑151
                                                                                                               TTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGT                                       >  2:923128/1‑150
                                                                                                                  AATGTGGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACG                                   >  1:893202/1‑151
                                                                                                                       GGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAA                               <  2:394684/150‑1
                                                                                                                       GGCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAA                               <  1:1159075/150‑1
                                                                                                                        GCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAA                             <  2:322086/151‑1
                                                                                                                        GCGTTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAA                              >  1:1301257/1‑150
                                                                                                                           TTGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGC                           >  2:435589/1‑150
                                                                                                                            TGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCAC                         >  1:1386099/1‑151
                                                                                                                            TGAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGGGTATGATGGCGTTTTTGAGTTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCAC                         >  2:501350/1‑151
                                                                                                                             GAGATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACC                        <  2:843800/151‑1
                                                                                                                               GATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACC                        <  1:1065806/149‑1
                                                                                                                                ATGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCC                     <  2:1440118/151‑1
                                                                                                                                 TGCTTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCG                    >  1:487388/1‑151
                                                                                                                                    TTAAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGAC                 >  1:1073817/1‑151
                                                                                                                                      AAAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACAT               >  2:585174/1‑151
                                                                                                                                       AAGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATC              >  2:1496880/1‑151
                                                                                                                                        AGGTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCA             <  1:284422/151‑1
                                                                                                                                          GTTCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGC           >  2:1107387/1‑151
                                                                                                                                            TCACAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCG          <  1:595873/150‑1
                                                                                                                                               CAACGCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACTGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTAT      >  2:58145/1‑151
                                                                                                                                                   GCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCT  >  1:274284/1‑151
                                                                                                                                                                                                                                                                                                          
CGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGATATGGCTGTCCGCCGCTCGCTTAAAGTGGACTTTTTAGTTTTTATCATGTGCGGTGAGAAATTCAATGTGGCGTTGAGATGCTTAAAGGTTCACAACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1199539‑1199687
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCT  <  NC_000913/1979270‑1979122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.