New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 269130	30 (1.070)	19 (0.720) +TCATGTCATTAGTGCGTT	16/550	0.7	57.4%	coding (377/414 nt)	LY180_01180	hypothetical protein
	?	CP006584	1594499 =	0 (0.000)					coding (168/909 nt)	LY180_07575	hypothetical protein

GATATTCTACTGTTGACTATTTGCGCTGTCATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGTGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGCGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAGGGTTGGGAAGATATAGAGGATTTTGGG  >  CP006584/268835‑269427                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                          tttatTCTCCTTTTTTCTGTTTGAGTTGTCTTTTCTGGTGAAGAAGTCTGGGAAGAGATTGAGGTTTTTGTTGAAACACATCTCGATTTTTTGAAGCAATATTGTGATTTTGAAAATGTTATTCCTGGTCACGATACCATTGCCAGCTTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTTCTTTATTAACTGGATGCGTGATTGTCATTCTTCATATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGAtga                                                                                                                                                                                                                                                                                                         <  2:157377/296‑3 (MQ=11)          cTGTTGACTATTTGCGCTGTCATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGTGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGCGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGat                                                                                                                                                                                                                                                                                                <  1:406/298‑1 (MQ=255)          cTGTTGACTATTTGCGCTGTCATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGTGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACAATCCCATTGCCAGCTTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCTTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGATTCGCCGCAGGGGAGCCATCCGGGAAAGaa                                                                                                                                                                                                                                                                                                >  2:85799/1‑297 (MQ=255)              tGACTATTTGCTATTTCATTTCTGGGGCAGAAGGTTGGGCAGCTATAGAGGATTTTGTGAAAACCAATCTCGATGTCTTGAAGCAATATGGGGATTTTGAAAATGTGATTCCTGTAGACGATACCATTGCCAGCGTTGTATCCTGTAGCAGTCCGGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGAGTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGagcatc                                                                                                                                                                                                                                                                                            <  2:42733/298‑1 (MQ=11)               gACTATTTGCGCTGTCATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGTGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGCGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGAtcatca                                                                                                                                                                                                                                                                                           <  1:24181/298‑1 (MQ=255)                          cTGTCATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGTGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGCGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACtt                                                                                                                                                                                                                                                                                <  1:26247/298‑1 (MQ=255)                                     ggTGCAGAAGGCTGGGAAGATATAGGGGATTTTGGGAAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGCGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTaaa                                                                                                                                                                                                                                                                     <  2:135951/298‑1 (MQ=255)                                       tGCTGAAGGCTTGAAATATATATAGGATTTTGGTGAAAAACCTTTTCGTTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGCGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTAGTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAaata                                                                                                                                                                                                                                                                   <  2:241752/298‑1 (MQ=17)                                           gAAGGCTGGGAAGATATAGAGGATTTTGGTGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGCGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTAc                                                                                                                                                                                                                                                                         >  2:245348/1‑288 (MQ=255)                                           gAAGGCTGGGAAGATATAGAGGATTTTGGTGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGCGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTAc                                                                                                                                                                                                                                                                         <  1:245348/288‑1 (MQ=255)                                                              agGATTTTGGTGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTACCAGCGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGGGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGCCAAGAGTCGCCGCAGGGGAGCGATCAGTGAAAGATCATCAGAAGTTCACTTTTTGTACTAAAAAATTCGACTTTTATTTTTAAAAAt                                                                                                                                                                                                                                            >  2:258217/1‑298 (MQ=255)                                                                                      atgttttgaaGTGATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATATCATTGCCAGAGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccat                                                                                                                                                                                                                    >  1:328628‑M1/4‑211 (MQ=255)                                                                                              gagtgatatgggggTTTTGAAAATTGTATTCCTGTTCACGATATCATTGCCAGAGTTGTATCCTTTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaac                                                                                                                                                                                                            <  2:197773‑M1/293‑96 (MQ=255)                                                                                                    tatGGGGTTTTTGAATATGGTATTCCTTTTCACGATATCATTGCTAGAGTTTTTTCCTGTATTAGTCCTTCAAAATTTCACGAGTGCTTTATTAACTGGATGCGGGACGTCCATTCTTCAGATGATAAAGACGGCATTGCACTTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGTGTAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttctta                                                                                                                                                                                                      <  2:328628‑M1/298‑102 (MQ=255)                                                                                                         ctcttccgtttttggtattccttttTAGGATATCATTGTCAGATTTTTATCCTTGATCAGTCCTTCAAAATTTTACGATTGCTTTAGTAACTGGATGCGTTACGGCCATTCTTCAGATGATAAAGACGTCATTGCAATGGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatg                                                                                                                                                                                                 <  2:122692‑M1/286‑107 (MQ=255)                                                                                                            ttttAAAAATCTTTTTTCTGGTCACGATTCCATTGCCAACTTTGTATCCTGTATCAGTCCTGCAATATTTCCTGATTGCTTGATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTTCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTGCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATGCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACAt                                                                                                                                                                                              <  2:309015/298‑1 (MQ=21)                                                                                                                      ggTATTCCTGTTCACGATATCATTGCCAGAGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatgaagatcggaagag                                                                                                                                                                                    >  1:122692‑M1/1‑179 (MQ=255)                                                                                                                         tgtCCTTTTCACGATACCATTGCCAGTGTTGTATCCTGTATCATTCCTGCAAAATTTAACGAGTGCTTTATTAACTTGTTGCGTGATTGTCATTCTTCAGATGATAAAGACGTCAGTGCAATTGATTGAAAAACGCTCCGGCATTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTCAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTcc                                                                                                                                                                                 <  2:178440/296‑1 (MQ=37)                                                                                                                            ccTGTTCACGATTCCATTGACAGCGTTGTATCCTGTATCAGTCCTGCAAAATTTGACGAGTGATTTATTAACTGCATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGTTAAAACGCTCCGGCACTCTTATGACAAGAGTCGGCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTa                                                                                                                                                                              <  1:287857/298‑1 (MQ=255)                                                                                                                             cTGTTCACGATATCATTGCCAGAGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTATTATGCCAAGAGTCGTCGCAGGGGAGCGATtcatgtcattattgcgtcctcaacaattcctagtctggtcctcggcaacatcaagacggatgagcaatctaatgagattacagcccttccataactcctaaacaagaagaatattaaaggaaaaat                                                                                                                                                                             >  2:25837‑M1/1‑172 (MQ=255)                                                                                                                               gTTCACGATACCATTGCCAGCGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAACACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACAt                                                                                                                                                                           <  1:327052/298‑1 (MQ=255)                                                                                                                                ttCACGATATCATTGCCAGAGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatgatggatattaaaggaaaaatcat                                                                                                                                                                          <  1:37400‑M1/298‑130 (MQ=255)                                                                                                                                     gATACCATTGCCAGCGTTGTATCCTGTATCAGTCCTGCACAATTTCACGAGCGCTTTTTTAACTGGATGCGTTATTGTCATTCTTCAGATGATAAAGACGTCATTGCCATTGATTGAACACCGCTCCGGCACTCTTATGAAAAGATTCGCCGCAAGGGAGCGATCAGGGAAAGATCATAAGAAGTTCACTTTTTGTACTACATACTTCGCATTTTATGTTTACAACTTCAGATATTCCTTATTACCTGACGTTGTTTTCTATTGCTTATAAATTATACAATACCCCTTACATACttca                                                                                                                                                                     >  2:226398/1‑296 (MQ=255)                                                                                                                                                cagagttgttgactgtattattcctGCAAAATTTCAGGAGTTGTTGATTAACTGGATGCGTGCTTGCAATTCTTCGAATGAGAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcatcggacagatcaagacggatgagaaatccaatgagattaaagccattcctgaacttcttaacatgatggatattaaaggaaaaatcatcacaactgatgcgatg                                                                                                                                                          <  2:302472‑M1/286‑146 (MQ=255)                                                                                                                                                cAGAGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatgatggatattaaaggaaaaatcatcacaactgatgcgatg                                                                                                                                                          >  1:82327‑M1/1‑153 (MQ=255)                                                                                                                                                   cGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATgg                                                                                                                                                       <  1:20136/298‑1 (MQ=255)                                                                                                                                                          tCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTaa                                                                                                                                                <  1:85799/298‑1 (MQ=255)                                                                                                                                                               tATTAGTCCTGCCAGATTTCACGAGTGATTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAAt                                                                                                                                           <  1:230846/298‑1 (MQ=255)                                                                                                                                                               tATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatgatggatattaaaggaaaaatcatcacaactgatgcgatgggctgccagaaagat                                                                                                                                           <  1:25837‑M1/298‑161 (MQ=255)                                                                                                                                                                 tCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACCAGAGTCGCCGCAGGGTAGAGATCAGGGAAAGATCATCAGAAGTTAACTTTTTGTACTAAATAATTCGCCATTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATTCATGATCAATTACTCCTTACATAATTAAGGAGAACAAAATGTAACTTAAAAAAttt                                                                                                                                         >  2:11634/1‑297 (MQ=255)                                                                                                                                                                    gTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATg                                                                                                                                      <  1:15680/298‑1 (MQ=255)                                                                                                                                                                                ttCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCt                                                                                                                          <  1:258217/298‑1 (MQ=255)                                                                                                                                                                                                taACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatgatggatattaaaggaaaaatcatcacaactgatgcgatgggctgccagaaagatattgcagaaaagatacaaaaacagggaggtgat                                                                                                          >  1:154939‑M1/1‑105 (MQ=255)                                                                                                                                                                                                  accagATGCGGTATTGTCATTCTTCATATGATAAAGCAGGCATTGCAATTGATGGAAACACGCTCCGGCACTCTTATGACAAGATTAGCCTCATGGGGGCGATTAGGTAAAGATCATCAGAAGTTCACTTTTTGTACTAAATTATTCGCATTTTATGTTTATAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATAGCTTATACATGATCAAATACTCCGTACATAATTACGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGa                                                                                                        <  2:301233/294‑1 (MQ=17)                                                                                                                                                                                                  aCTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatgatggatattaaaggaaaaatcatcacaactgatgcgatgggctgccagaaagatattgcagaaaagatacaaaaacagggaggtgatta                                                                                                        <  1:112470‑M1/298‑196 (MQ=255)                                                                                                                                                                                                        tGCGTTATTTGCATTCTTCAGGTGATAAAGACGTCATTGTAAATGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATT‑CTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCt                                                                                                 <  2:143886/298‑1 (MQ=255)                                                                                                                                                                                                        tGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatgatggatattaaaggaaaaatcatcacaactgatgcgatgggctgccagaaagatattgcagaaaagatacaaaaacagggaggtgattatttatt                                                                                                  >  1:280524‑M1/1‑97 (MQ=255)                                                                                                                                                                                                               ctgccattcTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatgatggatattaaaggaaaaatcatcacaactgatgcgatgggctgccagaaagatattgcagaaaagatacaaaaacagggaggtgattatttattcgcggta                                                                                           >  1:189597‑M1/5‑90 (MQ=255)                                                                                                                                                                                                                    aTTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGaa                                                                                      <  1:161025/298‑1 (MQ=255)                                                                                                                                                                                                                            gatgatAAAGACGTGAGTGCAATTGATGGAAAAACTGTCCGGGACGCTTATGGACAGAGTCGTCGCAGGGGAGCGATtcatgttagtagtgagttctcaacaatgcatagtctgggcctcgtacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatgatggatattaaaggaaaaatcatcacaactgaggcgatgggctgccagaaagatattgcagaaaagatacaaaaacagggaggtgattatttattcgcggtaaaaggaaaccagg                                                                              <  2:298367‑M1/298‑222 (MQ=255)                                                                                                                                                                                                                                                  ttGATGGACAAACGCTCCGGCACTCTTATGACCAGGGGCGTTGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcgtaacaggatggatattaaaggaaaactcatcacaactgatgcgatgggctgccagaaagatattgcagaaaagatacaaaaacagggaggtgattatttattcgcggtaaaaggaaaccaggggcggctaaataaagccgttga                                                        <  2:82327‑M1/298‑244 (MQ=255)                                                                                                                                                                                                                                                  ttGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatgatggatattaaaggaaaaatcatcacaactgatgcgatgggctgccagaaagatattgcagaaaagatacaaaaacagggaggtgattatttattcgcggtaaaaggaaaccaggggcggctaaataaagcctttga                                                        >  1:116331‑M1/1‑55 (MQ=255)                                                                                                                                                                                                                                                                cTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTAt                                          <  1:11634/298‑1 (MQ=255)                                                                                                                                                                                                                                                                         tctTATGACAAGAGTCGTCGCAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatgatggatattaaaggaaaaatcatcacaactgatgcgatgggctgccagaaagatattgcagaaaagatacaaaaacagggaggtgattatttattcgcggtaaaaggaaaccaggggcggctaaataaagcctttgaggaaaaatttccgctgaaagaat                                 <  1:89003‑M1/298‑267 (MQ=255)                                                                                                                                                                                                                                                                                 cAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAGGGtt                         >  1:248222/1‑298 (MQ=255)                                                                                                                                                                                                                                                                                            gcAGGGGAGCGATtcatgtcattagtgcgttctcaacaatgcatagtctggtcctcggacagatcaagacggatgagaaatccaatgagattacagccattcctgaacttcttaacatgatggatattaaaggaaaaatcatcacaactgatgcgatgggctgccagaaagatattgcagaaaagatacaaaaacagggaggtgattatttattcgcggtaaaaggaaaccaggggcggctaaataaagcctttgaggaaaaatttccgctgaaagaattaaataattcagagcatga              >  1:286389‑M1/1‑13 (MQ=255)                                                                                                                                                                                                                                                                                              tccggtttgATCAGGGAAAGATCATTAGAAGTTTACTTTTTGTACTTAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAGGGTTGGGAAGATATaga            <  2:4835/290‑1 (MQ=255)                                                                                                                                                                                                                                                                                                  gAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAGGGTTGGGAAGATATAGAGGAt        >  1:316165/1‑298 (MQ=37)                                                                                                                                                                                                                                                                                                       aTCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAGGGTTGGGAAGATATagagagatcgga   >  1:4835/1‑290 (MQ=25)                                                                                                                                                                                                                                                                                                        tCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGTAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGTCGTTATTTTTGGTGCAGGGGGTTGGGTAGATATAGAGGGTTTTggg  >  2:107995/1‑298 (MQ=255)                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                          GATATTCTACTGTTGACTATTTGCGCTGTCATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGTGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGCGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGTCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATCAGGGAAAGATCATCAGAAGTTCACTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCTTATTACCTGAAGCTGTTTTTTATTGCTTATACATGATCAAATACTCCTTACATAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAGGGTTGGGAAGATATAGAGGATTTTGGG  >  CP006584/268835‑269427

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.