| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5652989 = | 79 (1.580) | 19 (0.450) | 14/224 | 2.3 | 23.7% | intergenic (‑39/+122) | PP_4961/PP_4962 | lipoprotein/hypothetical protein |
| ? | NC_002947 | 5653045 = | 56 (1.330) | intergenic (‑95/+66) | PP_4961/PP_4962 | lipoprotein/hypothetical protein | |||||
ACGAAGACCACCAGCGCAAGGCGCCGGGTTGCCCTTGATCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5653148‑5652989‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGAC > NC_002947/5653045‑5653191 ACGAAGACCACCAGCGCAAGGCGCCGGGTTGCCCTTGATCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCG > 1:595948/1‑150ACGAAGACCACCAGCGCAAGGCGCCGGGTTGCCCTTGATCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGG > 1:312506/1‑145ACGAAGACCACCAGCGCAAGGCGCCGGGTTGCCCTTGATCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGG < 2:312506/145‑1 CACCAGCGCAAGGCGCCGGGTTGCCCTTGATCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCC > 1:885098/1‑150 ACCAGCGCAAGGCGCCGGGTTGCCCTTGATCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCC > 1:71877/1‑150 CCAGCGCAAGGCGCCGGGTTGCCCTTGGGTAGTTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCG > 1:342338/1‑150 CCAGCGCAAGGCGCCGGGTTGCCCTTGATCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCG > 2:275992/1‑150 CCAGCGCAAGGCGCCGGGTTGCCCTTGATCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCG > 2:296124/1‑150 GCAAGGCGCCGGGTTGCCCTTGATCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAG > 2:417206/1‑150 GCAAGGCGCCGGGTTGCCCTTGATCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAG < 2:405658/150‑1 TCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTC < 1:775535/150‑1 TCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTC < 2:316641/150‑1 CGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGA < 2:1158312/116‑1 CGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGA > 1:1158312/1‑116 TGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGAGAAGGGCTGCACAGCAGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTAT > 1:417206/1‑150 GCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTacg > 1:580103/1‑96 GCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAG < 2:580103/99‑1 CCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGAGAAGGGCTGCACAGCAGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTC < 1:316641/150‑1 CCGCTCCCACAGAGACTGCA‑‑‑‑‑‑CTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAA > 1:401011/1‑80 CCGCTCCCACAGAGACTGCA‑‑‑‑‑‑CTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAA < 2:401011/80‑1 CCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAG > 1:72235/1‑92 CCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAG < 2:72235/92‑1 CCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCC > 1:1149798/1‑97 CCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCC < 2:1149798/97‑1 ACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTT > 1:547700/1‑150 ACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTC > 1:844521/1‑67 ACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTC < 2:844521/67‑1 CACTGTACCTGTGGGAGCGGGCGAGCCCGAGAAGGGCTGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCT > 1:628362/1‑150 GTACCTGTGGGAGCGGGCGAGCCCGAGAAGGGCTGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCG < 2:628362/150‑1 CTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCC < 2:181981/150‑1 CTGTGGGAGCGGGCGAGCCCGAGAAGGGCTGCACAGCAGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCC < 2:775535/150‑1 GGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTG < 2:1138112/150‑1 GGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCAAGGCCTTCCGGGCCCACGCGCTTG > 2:169010/1‑150 GCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGG < 1:974342/81‑1 GCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGG > 2:974342/1‑81 CCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCGTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCATCGTACTTTTCCAGGCCTTCCGGGCCCCCGCGCTTGCCGATGAC > 1:1048003/1‑150 CCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGAC > 2:713431/1‑150 CCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGAC > 2:946180/1‑150 ACGAAGACCACCAGCGCAAGGCGCCGGGTTGCCCTTGATCGGGTAATAGGCAACCTGAACGTTGATTTGTGGTCTTGAAGAAGGGGCCGCTGTGCGGCCCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5653148‑5652989‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGAC > NC_002947/5653045‑5653191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |