New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5652989 =79 (1.580)19 (0.450) 14/224 2.3 23.7% intergenic (‑39/+122) PP_4961/PP_4962 lipoprotein/hypothetical protein
?NC_002947 5653045 = 56 (1.330)intergenic (‑95/+66) PP_4961/PP_4962 lipoprotein/hypothetical protein

CAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGG  >  NC_002947/5652897‑5653194
                                                                                                                                                    |                                                                                                                                                     
cagTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCcgcg                                                                                                                                                      >  1:1101707/1‑150 (MQ=255)
 agTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCCCCCACAGGTACAGTGCAGTATCTGTGGGAGCGGGCGAGCCCGCGa                                                                                                                                                     >  1:487034/1‑150 (MQ=255)
   gcaaggcgccgggttgcccttgatcgggtaataggcaacctgaacgttgatttgtggtcttgaagaaggggctgctgtgcagcccttctcgggctcgcccgctcccacaggtacagtgcagtctctgtgggagcgggcgagcccgCGAAg                                                                                                                                                   >  2:417206‑M2/146‑150 (MQ=255)
   gcaaggcgccgggttgcccttgatcgggtaataggcaacctgaacgttgatttgtggtcttgaagaaggggccgctgtgcagcccttctcgggctcgcccgctcccacaggtacagtgcagtctctgtgggagcgggcgagcccgCGAAg                                                                                                                                                   <  2:405658‑M2/5‑1 (MQ=255)
     aGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAggg                                                                                                                                                 >  1:919612/1‑150 (MQ=255)
          ccTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGca                                                                                                                                            >  2:173393/1‑150 (MQ=255)
            tGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGcaca                                                                                                                                          >  1:1138112/1‑150 (MQ=255)
            tGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGcaca                                                                                                                                          >  2:1152588/1‑150 (MQ=255)
               cAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAATGGCCGCACAGCg                                                                                                                                       <  1:356853/150‑1 (MQ=255)
               cAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCg                                                                                                                                       <  1:158498/150‑1 (MQ=255)
               cAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTACTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCg                                                                                                                                       >  2:595948/1‑150 (MQ=255)
                   gtCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGccc                                                                                                                                   <  1:1152588/150‑1 (MQ=255)
                    tCGCCAGTGCCATCACGGCCAAAACCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGcccc                                                                                                                                  <  1:792699/150‑1 (MQ=255)
                          tcgggtaataggcaacctgaacgttgatttgtggtcttgaagaaggggctgctgtgcagcccttctcgggctcgcccgctcccacaggtacagtgcagtctctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCttcttc                                                                                                                            <  2:316641‑M2/28‑1 (MQ=255)
                          tcgggtaataggcaacctgaacgttgatttgtggtcttgaagaaggggctgctgtgcagcccttctcgggctcgcccgctcccacaggtacagtgcagtctctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCttcttc                                                                                                                            <  1:775535‑M2/28‑1 (MQ=255)
                            gCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCaa                                                                                                                          <  2:1101707/150‑1 (MQ=255)
                             ccGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGCCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGCGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAg                                                                                                                         >  2:274680/1‑150 (MQ=255)
                              cGTCACGGCGAAAAGCGCTTTGATTCAGTTTCCTGCATTTGGGCCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCTCCGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGa                                                                                                                        <  1:619465/150‑1 (MQ=38)
                               gTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGAc                                                                                                                       <  1:1177282/150‑1 (MQ=255)
                               gTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGAc                                                                                                                       >  1:142079/1‑150 (MQ=255)
                                 ataggcaacctgaacgttgatttgtggtcttgaagaaggggctgctgtgcagcccttctCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACca                                                                                                                     >  1:417206‑M1/60‑150 (MQ=255)
                                       cAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCAGCTGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCCCCTTCAAGACCACAAATc                                                                                                               >  1:1008392/1‑150 (MQ=39)
                                         aaaGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCaa                                                                                                             >  2:584410/1‑150 (MQ=255)
                                                tttCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAg                                                                                                      >  1:1000184/1‑150 (MQ=255)
                                                  tcattcaGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGt                                                                                                    <  1:913129/150‑1 (MQ=255)
                                                     ttcaGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGaa                                                                                                                                                    >  2:706221/1‑99 (MQ=255)
                                                     ttcaGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGaa                                                                                                                                                    <  1:706221/99‑1 (MQ=255)
                                                     ttcaGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGc                                                                                                 <  2:919612/150‑1 (MQ=255)
                                                        aGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCGCAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAGGGGCCGCTGTGCGGcccttcgc                                                                                                                              <  2:662029/118‑6 (MQ=37)
                                                        aGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCGCAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAGGGGCCGCTGTGCGGcccttcgc                                                                                                                              >  1:662029/1‑113 (MQ=37)
                                                        aGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTa                                                                                              >  2:525154/1‑150 (MQ=255)
                                                         tggtcttgaagaaggggccgctgtgcggcccttcgcgggctcgcccgctcccacagagactgcactgtacctgtgggagcgggcgagcccgAGAAGGGCTGCACAGCAGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTAt                                                                                             >  1:417206‑M2/92‑150 (MQ=255)
                                                            tCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTAc                                                                                          <  1:502104/150‑1 (MQ=255)
                                                              cTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTAccc                                                                                        >  1:275992/1‑150 (MQ=255)
                                                              cTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTAccc                                                                                        >  1:140294/1‑150 (MQ=255)
                                                              cTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTAccc                                                                                        <  1:714196/150‑1 (MQ=255)
                                                              cTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTCAAGACCACAAATCAACGTTCAGGTTGCCTATTAcccc                                                                                       >  2:640604/1‑149 (MQ=255)
                                                               tCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCACGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCg                                                                                       >  1:96598/1‑150 (MQ=255)
                                                               tCGAGTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGGACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCg                                                                                       >  2:979857/1‑150 (MQ=255)
                                                                gaagaaggggccgctgtgcggcccttcgCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGAGAAGGGCTGCACAGCAGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGa                                                                                      <  2:316641‑M1/122‑1 (MQ=255)
                                                                gaagaaggggccgctgtgcggcccttcgCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGAGAAGGGCTGCACAGCAGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGa                                                                                      <  1:775535‑M1/122‑1 (MQ=255)
                                                                  aTTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGGCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGAtg                                                                                    >  1:273461/1‑149 (MQ=255)
                                                                    ttGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCaa                                                                                  <  1:769595/150‑1 (MQ=255)
                                                                    ttGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACACTTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCaa                                                                                  <  1:570307/150‑1 (MQ=255)
                                                                     tGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTAGAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAg                                                                                 <  2:251594/150‑1 (MQ=255)
                                                                     tGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAg                                                                                 <  1:173393/150‑1 (MQ=255)
                                                                     tGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAg                                                                                 <  2:1008392/150‑1 (MQ=255)
                                                                       gggCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAggg                                                                               <  2:142079/150‑1 (MQ=255)
                                                                            gctgTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAAcc                                                                          <  2:600941/150‑1 (MQ=255)
                                                                                  cAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGgcgc                                                                    >  2:38024/1‑150 (MQ=255)
                                                                                  cAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGgcgc                                                                    <  2:140294/150‑1 (MQ=255)
                                                                                     cccTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCtt                                                                 >  1:181981/1‑150 (MQ=255)
                                                                                       cttcgCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGAGAAGGGCTGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTgc                                                               <  2:405658‑M1/145‑1 (MQ=255)
                                                                                       cttcgCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGAGAAGGGCTGCACAGCAGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTgc                                                               >  2:417206‑M1/6‑150 (MQ=255)
                                                                                       cTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAACACCGTGGCCGGACGATCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTgc                                                               >  2:342338/1‑150 (MQ=38)
                                                                                        ttCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTgcg                                                              >  1:833408/1‑150 (MQ=255)
                                                                                            CGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtgg                                                          >  2:275992‑M1/1‑150 (MQ=255)
                                                                                            CGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtgg                                                          >  2:296124‑M1/1‑150 (MQ=255)
                                                                                            CGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTAACTACCCAAGGGCAACCCGGCGCCTTGCGCtgg                                                          >  1:342338‑M1/1‑150 (MQ=255)
                                                                                             GGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtggt                                                         >  1:71877‑M1/1‑150 (MQ=255)
                                                                                              GGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtggtg                                                        >  1:885098‑M1/1‑150 (MQ=255)
                                                                                                 TCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCg                                                                                       >  1:1158312‑M1/1‑116 (MQ=255)
                                                                                                 TCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCg                                                                                       <  2:1158312‑M1/116‑1 (MQ=255)
                                                                                                   gcccgctcccacagagactgcactgtacctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAacgttacg                                                                                                      >  1:580103‑M2/50‑96 (MQ=255)
                                                                                                   gcccgctcccacagagactgcactgtacctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAg                                                                                                      <  2:580103‑M2/50‑1 (MQ=255)
                                                                                                    cccgctcccacagagactgcactgtacctgtgggagcgggcgagcccgAGAAGGGCTGCACAGCAGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTtc                                                  <  1:316641‑M2/102‑1 (MQ=255)
                                                                                                      CGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTtcgt                                                >  1:595948‑M1/1‑150 (MQ=255)
                                                                                                          cccacagagactgcactgtacctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAg                                                                                                      >  1:72235‑M2/43‑92 (MQ=255)
                                                                                                          cccacagagactgcactgtacctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAg                                                                                                      <  2:72235‑M2/50‑1 (MQ=255)
                                                                                                           ccgctcccacagagactgcactgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACaaa                                                                                                                 <  2:401011‑M2/39‑1 (MQ=255)
                                                                                                           ccgctcccacagagactgcactgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACaaa                                                                                                                 >  1:401011‑M2/42‑80 (MQ=255)
                                                                                                           ccacagagactgcactgtacctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGcc                                                                                                >  1:1149798‑M2/42‑97 (MQ=255)
                                                                                                           ccacagagactgcactgtacctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGcc                                                                                                <  2:1149798‑M2/56‑1 (MQ=255)
                                                                                                           CCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTtcgt                                                <  2:312506‑M1/145‑1 (MQ=255)
                                                                                                           CCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTtcgt                                                >  1:312506‑M1/1‑145 (MQ=255)
                                                                                                             acagagactgcactgtacctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCttcttc                                                                                                                            <  2:844521‑M2/28‑1 (MQ=255)
                                                                                                             acagagactgcactgtacctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCttcttc                                                                                                                            >  1:844521‑M2/40‑67 (MQ=255)
                                                                                                             acagagactgcactgtacctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACtt                                         >  1:547700‑M2/40‑150 (MQ=255)
                                                                                                                 gTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAg                                                                                 >  1:1091988/1‑106 (MQ=255)
                                                                                                                 gTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAg                                                                                 <  2:1091988/106‑1 (MQ=255)
                                                                                                                    cAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAgg                                  <  1:38024/150‑1 (MQ=255)
                                                                                                                       tGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCt                               >  2:597484/1‑150 (MQ=255)
                                                                                                                       cactgtacctgtgggagcgggcgagcccgAGAAGGGCTGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCt                               >  1:628362‑M2/30‑150 (MQ=255)
                                                                                                                        gCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACtt                                         >  2:76415/1‑139 (MQ=255)
                                                                                                                        gCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAAACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACtt                                         <  1:76415/139‑1 (MQ=255)
                                                                                                                          aGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTcc                            <  2:214049/150‑1 (MQ=255)
                                                                                                                           gtacctgtgggagcgggcgagcccgAGAAGGGCTGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCg                           <  2:628362‑M2/125‑1 (MQ=255)
                                                                                                                            tctcTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCgg                          >  1:141961/1‑150 (MQ=255)
                                                                                                                              tctGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGc                        >  1:621190/1‑150 (MQ=255)
                                                                                                                              tctGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGc                        <  2:1000184/150‑1 (MQ=255)
                                                                                                                               ctgtgggagcgggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGcc                       <  2:181981‑M2/129‑1 (MQ=255)
                                                                                                                               ctgtgggagcgggcgagcccgAGAAGGGCTGCACAGCAGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGcc                       <  2:775535‑M2/129‑1 (MQ=255)
                                                                                                                                         gggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTg             <  2:1138112‑M2/139‑1 (MQ=255)
                                                                                                                                         gggcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCAAGGCCTTCCGGGCCCACGCGCTTg             >  2:169010‑M2/12‑150 (MQ=255)
                                                                                                                                           gcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAgg                                                                                <  1:974342‑M2/72‑1 (MQ=255)
                                                                                                                                           gcgagcccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAgg                                                                                >  2:974342‑M2/10‑81 (MQ=255)
                                                                                                                                                 ccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCGTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCATCGTACTTTTCCAGGCCTTCCGGGCCCCCGCGCTTGCCGATGAc     >  1:1048003‑M2/4‑150 (MQ=255)
                                                                                                                                                 ccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGAc     >  2:713431‑M2/4‑150 (MQ=255)
                                                                                                                                                 ccgCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGAc     >  2:946180‑M2/4‑150 (MQ=255)
                                                                                                                                                    cgAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCgg  <  1:597484/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCCCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGG  >  NC_002947/5652897‑5653194

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.