| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5724339 | 28 (0.850) | 7 (0.260) | 7/218 | 2.3 | 20.0% | intergenic (‑185/+109) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| ? | NC_002947 | = 5724358 | 33 (1.230) | intergenic (‑204/+90) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H | |||||
AAAAGTAGCGAATCTTATTGTGTTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5724174‑5724339‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggtgaacccgctcctacCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGCTTTTTGGCCTAACCCCCTCATTTTGGCCAACAAAGTCCCCCTGCGGCTCTAGGTCCACGGGCCGCCATGCGTTAGCATCCCTCTCCGATACGACGCTTCGGC < NC_002947/5724358‑5724213 AAAAGTAGCGAATCTTATTGTGTTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCag < 2:407750/150‑3 GTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGAGTAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGT < 1:50784/150‑1 ctGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTC > 1:509841/3‑72 ctGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTC < 2:509841/70‑1 GGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCA < 1:689925/115‑1 GGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCA > 2:689925/1‑115 GGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGA > 1:245065/1‑90 GGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGA < 2:245065/90‑1 GCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAG < 1:747975/56‑1 GCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAG > 2:747975/1‑56 AACCCGCTCCTACCAGGGATACACATGCCCTTGTCGGTCCCGCTTCACCCGCGAAGCTTTTTGGCCTAACCCCCTCATTTTGGCCAACAAAGTCCCCCTGCGGCTCTAGGTCCACGGGCCGCCATGCGTTAGCATCCCTCTCCGATACGA < 1:657554/150‑1 GCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGCTTTTTGGCCTAACCCCCTCATTTTGGCCAACAAAGTCCCCCTGCGGCTCTAGGTCCACGGGCCGCCATGCGTTAGCATCCCTCTCCGATACGACGCTT > 2:461449/1‑150 GCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGCTTTTTGGCCTAACCCCCTCATTTTGGCCAACAAAGTCCC > 1:752750/1‑91 GCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGCTTTTTGGCCTAACCCCCTCATTTTGGCCAACAAAGTCCC < 2:752750/91‑1 TCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGCTTTTTGGCCTAACCCCCTCATTTTGGCCAACAAAGTCCC > 2:790194/1‑89 TCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGCTTTTTGGCCTAACCCCCTCATTTTGGCCAACAAAGTCCC < 1:790194/89‑1 gTACTAGGGATACACATGCCCGTGTAGGGGCGGGTTCACCCGCGAAGCTTTTTGGCCTAACCCCCTCATTTTGGCCAACAAGGTCCCCCTGCGGCTCTAGGTCCACGGGCCGACATGCGTTAGCATCCCTCTCCGATACGACGCTTCGGC < 2:124173/149‑1 AAAAGTAGCGAATCTTATTGTGTTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5724174‑5724339‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggtgaacccgctcctacCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGCTTTTTGGCCTAACCCCCTCATTTTGGCCAACAAAGTCCCCCTGCGGCTCTAGGTCCACGGGCCGCCATGCGTTAGCATCCCTCTCCGATACGACGCTTCGGC < NC_002947/5724358‑5724213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |