| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5724339 | 28 (0.850) | 7 (0.260) | 7/218 | 2.3 | 20.0% | intergenic (‑185/+109) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| ? | NC_002947 | = 5724358 | 33 (1.230) | intergenic (‑204/+90) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H | |||||
TGTGTTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGG > NC_002947/5724192‑5724486 | tgtgTTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACaa < 1:164367/150‑1 (MQ=255) tcgCACTGCTGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCa < 2:497865/148‑1 (MQ=255) gCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGTCGGCCCGTGGACCTAGAGCCGCAGGGGGACCTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCCCCTACACGGGCATGTGTATCCCTAgtac < 2:124173‑M2/150‑5 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGgtaggagc > 2:461449‑M2/1‑142 (MQ=255) gtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGAGTAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACcagggatacacatgcccttgtaggagcgggt < 1:50784‑M1/150‑32 (MQ=255) tcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAAGCGGGACCGACAAGGGCATGTGTATCCCTGgtaggagcgggtt < 1:657554‑M2/150‑14 (MQ=255) gcCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCg > 2:762327/1‑150 (MQ=255) ggACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACcagggatacacatgcccttgtaggagcgggttca < 1:689925‑M1/115‑35 (MQ=255) ggACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACcagggatacacatgcccttgtaggagcgggttca > 2:689925‑M1/1‑81 (MQ=255) gACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGc > 1:752171/1‑127 (MQ=255) gACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGc < 2:752171/127‑1 (MQ=255) ccGCAGGGGGACTTTGTTGGCCAAAATGAGAGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCg < 1:124173/150‑1 (MQ=255) aGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTATGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAg < 1:366720/133‑1 (MQ=255) aGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTATGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAg > 2:366720/1‑133 (MQ=255) ggggACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACcagggatacacatgcccttgtagga < 2:245065‑M1/90‑26 (MQ=255) ggggACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACcagggatacacatgcccttgtagga > 1:245065‑M1/1‑65 (MQ=255) gggACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGgtaggagc < 2:752750‑M2/91‑9 (MQ=255) gggACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGgtaggagc > 1:752750‑M2/1‑83 (MQ=255) gggACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGgtagga > 2:790194‑M2/1‑83 (MQ=255) gggACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGgtagga < 1:790194‑M2/89‑7 (MQ=255) gCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGa > 1:268573/1‑150 (MQ=255) cAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAAc > 2:570264/1‑150 (MQ=255) cAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAAc > 2:810326/1‑150 (MQ=255) aaaaTGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACa < 1:53282/150‑1 (MQ=255) aaaaTGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTCCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACa < 1:762327/150‑1 (MQ=255) aaaaTGAGGGGGTTAGGACAAAAAGAATCGCGGGTGCACCCGCTCCTACAAGGGCATGTGTATCGCTGGTAGGAGCGTTTTCTCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACa < 2:657554/150‑1 (MQ=255) aaaTGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGaa > 1:66033/1‑137 (MQ=255) aaaTGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGaa < 2:66033/137‑1 (MQ=255) gggggTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGa < 1:266807/150‑1 (MQ=255) ggggTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAgg > 1:16398/1‑45 (MQ=255) ggggTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAgg < 2:16398/45‑1 (MQ=255) ggggTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCAGAt > 1:180073/1‑150 (MQ=255) ggCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAgcgc < 1:810326/150‑1 (MQ=255) gCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACcagggatacacatgcccttgtag > 2:747975‑M1/1‑33 (MQ=255) gCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACcagggatacacatgcccttgtag < 1:747975‑M1/56‑24 (MQ=255) aaaGCGTCGCGGGTAAAGCCGCTGCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCcgacga < 2:268573/150‑1 (MQ=255) gTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCACGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc > 2:641161/1‑150 (MQ=255) tGAACCCGCTCCTACAAGGGCATGTGTATCCCTGgtaggagcgggttcacccgcgaagctttttggcctaaccccctcattttggccaacaaagtccccctgcggctctaggtcc > 2:689925‑M2/1‑34 (MQ=255) tGAACCCGCTCCTACAAGGGCATGTGTATCCCTGgtaggagcgggttcacccgcgaagctttttggcctaaccccctcattttggccaacaaagtccccctgcggctctaggtcc < 1:689925‑M2/115‑82 (MQ=255) aaCCCGCTCCTACcagggatacacatgcccttgtcggtcccgcttcacccgcgaagctttttggcctaaccccctcattttggccaacaaagtccccctgcggctctaggtccacgggccgccatgcgttagcatccctctccgatacga < 1:657554‑M1/150‑138 (MQ=255) aCCCGCTCCTACAAGGGCATGTGTATCCCTGgtaggagcgggttcacccgcgaagctttttggcctaaccccctcattttactcaacaaagtccccctgcggctctaggtccacgggccgccatgcgttagcatccctctccgatacgac < 1:50784‑M2/150‑120 (MQ=255) cccGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 1:328735/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 1:577081/1‑150 (MQ=255) gCTCCTACcagggatacacatgcccttgtaggagcgggttcacccgcgaagctttttggcctaaccccctcattttggccaacaaagtccccctgcggctctaggtccacgggccgccatgcgttagcatccctctccgatacgacgctt > 2:461449‑M1/1‑8 (MQ=255) gCTCCTACcagggatacacatgcccttgtaggagcgggttcacccgcgaagctttttggcctaaccccctcattttggccaacaaagtccc < 2:752750‑M1/91‑84 (MQ=255) gCTCCTACcagggatacacatgcccttgtaggagcgggttcacccgcgaagctttttggcctaaccccctcattttggccaacaaagtccc > 1:752750‑M1/1‑8 (MQ=255) tCCTACcagggatacacatgcccttgtaggagcgggttcacccgcgaagctttttggcctaaccccctcattttggccaacaaagtccc > 2:790194‑M1/1‑6 (MQ=255) tCCTACcagggatacacatgcccttgtaggagcgggttcacccgcgaagctttttggcctaaccccctcattttggccaacaaagtccc < 1:790194‑M1/89‑84 (MQ=255) tCCTACAAGGGCATGTGTATCCCTGgtaggagcgggttcacccgcgaagctttttggcctaaccccctcattttggccaacaaagtcccc < 2:245065‑M2/90‑66 (MQ=255) tCCTACAAGGGCATGTGTATCCCTGgtaggagcgggttcacccgcgaagctttttggcctaaccccctcattttggccaacaaagtcccc > 1:245065‑M2/1‑25 (MQ=255) gtaCtagggatacacatgcccgtgtaggggcgggttcacccgcgaagctttttggcctaaccccctcattttggccaacaaggtccccctgcggctctaggtccacgggccgacatgcgttagcatccctctccgatacgacgcttcggc < 2:124173‑M1/149‑147 (MQ=255) cTACAAGGGCATGTGTATCCCTGgtaggagcgggttcacccgcgaagctttttggc < 1:747975‑M2/56‑34 (MQ=255) cTACAAGGGCATGTGTATCCCTGgtaggagcgggttcacccgcgaagctttttggc > 2:747975‑M2/1‑23 (MQ=255) cTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGa > 2:204975/1‑112 (MQ=255) cTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGa < 1:204975/112‑1 (MQ=255) tACAAGGGCATGTGTATTCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACATACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg < 1:61643/150‑1 (MQ=255) | TGTGTTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGG > NC_002947/5724192‑5724486 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |