New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5626241 =	13 (0.800)	3 (0.200)	3/242	NT	19.2%	coding (1312/1758 nt)	PP_4944	carbamoyltransferase
	?	NC_002947	5626320 =	13 (0.850)					coding (1233/1758 nt)	PP_4944	carbamoyltransferase

CCAGATCATGGTCGATGGCAACCCGGTAGCCTGGTTCCAGGGCCGCATGGAGTTCGGGCCGCGTGCCCTGGGTGGCCGATCGATCATCGGTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5626335‑5626241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttgccATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGAACGC  >  NC_002947/5626320‑5626468                                                                                                                                                                                                                                                      CCAGATCATGGTCGATGGCAACCCGGTAGCCTGGTTCCAGGGCCGCATGGAGTTCGGGCCGCGTGCCCTGGGTGGCCGATCGATCATCGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTC                                                                                                >  1:216001/1‑150              GATGGCAACCCGGTAGCCTGGTTCCAGGGCCGCATGGAGTTCGGGCCGCGTGCCCTGGGTGGCCGATCGATCATCGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGT                                                                                   >  2:120666/1‑150                              CCTGGTTCCAGGGCCGCATGGAGTTCGGGCCGCGTGCCCTGGGTGGCCGATCGATCATCGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGC                                                                   <  1:120666/150‑1                                                                                           TTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGA      >  2:276013/1‑150                                                                                               CATCGACCATGATCTGGGCAATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGTAGTTCGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGAACGC  >  2:12031/1‑150                                                                                                                                                                                                                                                      CCAGATCATGGTCGATGGCAACCCGGTAGCCTGGTTCCAGGGCCGCATGGAGTTCGGGCCGCGTGCCCTGGGTGGCCGATCGATCATCGGTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5626335‑5626241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttgccATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGAACGC  >  NC_002947/5626320‑5626468

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.