New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5626241 =	13 (0.800)	3 (0.200)	3/242	NT	19.2%	coding (1312/1758 nt)	PP_4944	carbamoyltransferase
	?	NC_002947	5626320 =	13 (0.850)					coding (1233/1758 nt)	PP_4944	carbamoyltransferase

TTCGAAGGTGAAGGTCATGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGG  >  NC_002947/5626092‑5626385                                                                                                                                                      |                                                                                                                                                 ttCGAAGGTGAAGGTCATGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACTGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTggg                                                                                                                                                  <  2:425087/150‑1 (MQ=255) gcgttccggtcgagaagatggagcacgtctacctcggcccgtcgaactacaacgaagacgtgatcgccgcctgcgcccgtcacccgaaccagccgaagtggcgcaaactcgagaacatgccgcagcagattgcccagatcatggtcgatg                                                                                                                                                  >  2:12031‑M1/150‑150 (MQ=255)    gaaggtgaaggtCATGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCa                                                                                                                                               >  1:176271/1‑150 (MQ=255)     tccggtcgagaagatggagcacgtctacctcggcccgtcgtactccaacgaagacgtgatcgccgcctgcgcccgtcacccgaaccagccgaagtggcgcaaactcgagaacatgccgcagcagatcgcccagatcatggtcgatGGCaa                                                                                                                                              >  2:276013‑M1/146‑150 (MQ=255)               tCATGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATgatcg                                                                                                                                    >  1:376761/1‑150 (MQ=255)                cATGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGCGCAACGACGTGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATgatcga                                                                                                                                   >  2:394691/1‑150 (MQ=255)                 aTGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATgatcgat                                                                                                                                  <  2:376761/150‑1 (MQ=255)                  tGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATgatcgatc                                                                                                                                 <  2:305198/150‑1 (MQ=255)                     aCGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGc                                                                                                                              <  2:127403/150‑1 (MQ=255)                                       ccTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTgg                                                                                                                                                  >  1:393676/1‑112 (MQ=255)                                       ccTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTgg                                                                                                                                                  <  2:393676/112‑1 (MQ=255)                                                  tGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATg                                                                                                 <  2:256597/150‑1 (MQ=255)                                                               tgtCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAAcc                                                                                    >  1:428976/1‑150 (MQ=255)                                                               tgtCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAAcc                                                                                    >  2:437853/1‑150 (MQ=255)                                                                  gccgcctgcgcccgtcacccgaaccagccgaagtggcgcaaactcgagaacatgccgcagcagatcgcccagatcatggtcgatGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAgg                                                                                 <  1:120666‑M1/66‑1 (MQ=255)                                                                          gACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCggg                                                                         <  2:176271/150‑1 (MQ=255)                                                                            cGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGtt                                                                       <  1:394691/150‑1 (MQ=255)                                                                                  acccgaaccagccgaagtggcgcaaactcgagaacatgccgcagcagatcgcccagatcatggtcgatGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATc                                                                 >  2:120666‑M1/69‑150 (MQ=255)                                                                                     aGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAgg                                                                                                                      <  2:354188/94‑1 (MQ=255)                                                                                     aGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAgg                                                                                                                      >  1:354188/1‑94 (MQ=255)                                                                                               gaagtggcgcaaactcgagaacatgccgcagcagatcgcccagatcatggtcgatGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTgg                                                    >  1:216001‑M1/56‑150 (MQ=255)                                                                                                                                      aCGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTc             <  2:439771/150‑1 (MQ=255)                                                                                                                                                 gCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGCTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCgg  >  1:403267/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                 TTCGAAGGTGAAGGTCATGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGG  >  NC_002947/5626092‑5626385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.