New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5626241 =	13 (0.800)	3 (0.200)	3/242	NT	19.2%	coding (1312/1758 nt)	PP_4944	carbamoyltransferase
	?	NC_002947	5626320 =	13 (0.850)					coding (1233/1758 nt)	PP_4944	carbamoyltransferase

GAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGAACGC  >  NC_002947/5626173‑5626468                                                                                                                                                    |                                                                                                                                                     acccgaaccagccgaagtggcgcaaactcgagaacatgccgcagcagatcgcccagatcatggtcgatGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATc                                                                                                                                                    >  2:120666‑M1/69‑150 (MQ=255)              gaagtggcgcaaactcgagaacatgccgcagcagatcgcccagatcatggtcgatGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTgg                                                                                                                                       >  1:216001‑M1/56‑150 (MQ=255)                                                     ccagatcatggtcgatggcaacccggtagcctggttccagggccgcatggagttcgggccgcgtgccctgggtggccgatcgatcatcggttgccATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTc                                                                                                >  1:216001‑M2/96‑150 (MQ=255)                                                     aCGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTc                                                                                                <  2:439771/150‑1 (MQ=255)                                                                gCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGCTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCgg                                                                                     >  1:403267/1‑150 (MQ=255)                                                                  gatggcaacccggtagcctggttccagggccgcatggagttcgggccgcgtgccctgggtggccgatcgatcatcggttgccATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGt                                                                                   >  2:120666‑M2/83‑150 (MQ=255)                                                                               gatcgatcGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAggc                                                                      >  2:18785/1‑150 (MQ=255)                                                                                  cctggttccagggccgcatggagttcgggccgcgtgccctgggtggccgatcgatcatcggttgccATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAggcggc                                                                   <  1:120666‑M2/84‑1 (MQ=255)                                                                                    atcgGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGa                                                                 <  1:437853/150‑1 (MQ=255)                                                                                          cACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGt                                                           <  1:183651/150‑1 (MQ=255)                                                                                            cccAGCGCACGCCGCCCAAACTCCATGCGTCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCt                                                         <  2:428976/150‑1 (MQ=255)                                                                                                 ggCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAggcgg                                                                    <  1:331668/134‑1 (MQ=255)                                                                                                 ggCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAggcgg                                                                    >  2:331668/1‑134 (MQ=255)                                                                                                    aCGCGGCTCTAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGa                                                 <  1:18785/150‑1 (MQ=255)                                                                                                        ggCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCt                                                                                            >  1:307706/1‑103 (MQ=255)                                                                                                        ggCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCt                                                                                            <  2:307706/103‑1 (MQ=255)                                                                                                          cccGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTacga                                           >  2:243892/1‑150 (MQ=255)                                                                                                                   cATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAg                                  <  1:243892/150‑1 (MQ=255)                                                                                                                                        tACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTGCGGGTGTTTCGGGTGACGGGCGAACGCGCCGATCACCTCTTAGTTGGAGTACGACGGGCACAGGTAGACGTGCCCCGTCGtctc             >  2:189169/1‑150 (MQ=255)                                                                                                                                               ttgccATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGa      >  2:276013‑M2/6‑150 (MQ=255)                                                                                                                                                   cATCGACCATGATCTGGGCAATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGTAGTTCGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGAACGc  >  2:12031‑M2/2‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGAACGC  >  NC_002947/5626173‑5626468

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.