New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5665145	20 (1.240)	4 (0.270)	4/238	NT	16.5%	coding (611/834 nt)	PP_4973	membrane protein
	?	NC_002947	= 5665165	22 (1.460)					coding (591/834 nt)	PP_4973	membrane protein

GGTTCTTTGAGGTAGCGCATGCCCAGCAGCACCACCAGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5664989‑5665145 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccattCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGTTGGCGGTAGGGTTCTGCGTATTGTTCAGCTATGCCCTGGTGCTGTGGGCCATGCACCTGGGGTCAGTGGCCGAAGCGGCGGCACTGCGGGAGTTGAGCGTGATCCTGGTG  <  NC_002947/5665165‑5665021                                                                                                                                                                                                                                                                                                                GGTTCTTTGAGGTAGCGCATGCCCAGCAGCACCACCAGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGG                                                                                                                                                          <  1:435727/150‑1  GTTCTTTGAGGTAGCGCATGCCCAGCAGCACCACCAGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGC                                                                                                                                                         >  1:341923/1‑150                                                       CGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGTT                                                                                                               >  1:249436/1‑139                                                       CGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGTT                                                                                                               <  2:249436/139‑1                                                                                   CCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGT                                                                                                                >  1:214100/1‑110                                                                                   CCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATTCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGT                                                                                                                <  2:214100/110‑1                                                                                                                                                         CCATTCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGTTGGCGGTAGGGTTCTGCGTATTGTTCAGCTATGCCCTGGTGCTGTGGGCCATGCACCTGGGGTCAGTGGCCGAAGCGGCGGCACTGCGGGAGTTGAGCGTGATCCTGGTG  <  2:193101/150‑1                                                                                                                                                                                                                                                                                                                GGTTCTTTGAGGTAGCGCATGCCCAGCAGCACCACCAGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGGCATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAAGGCGCCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5664989‑5665145 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccattCGTACTGTTCTGGCGAACCCAATGGCGCCTTGGGTTGGCGGTAGGGTTCTGCGTATTGTTCAGCTATGCCCTGGTGCTGTGGGCCATGCACCTGGGGTCAGTGGCCGAAGCGGCGGCACTGCGGGAGTTGAGCGTGATCCTGGTG  <  NC_002947/5665165‑5665021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.