| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5665145 | 20 (1.240) | 4 (0.270) | 4/238 | NT | 16.5% | coding (611/834 nt) | PP_4973 | membrane protein |
| ? | NC_002947 | = 5665165 | 22 (1.460) | coding (591/834 nt) | PP_4973 | membrane protein | |||||
CACCAGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCAGGTGTA > NC_002947/5665021‑5665290 | caccaGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGaatgg < 2:193101‑M2/150‑6 (MQ=255) ccaGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAATGGCGCC‑TTGGGttgg < 1:332928/130‑3 (MQ=255) ccaGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAATGGCGCC‑TTGGGttgg > 2:332928/1‑128 (MQ=255) ccaGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTa > 1:41147/1‑141 (MQ=255) ccaGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTa < 2:41147/141‑1 (MQ=255) gATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGcgcccg > 2:96807/1‑150 (MQ=255) gCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCgcgc > 2:12599/1‑150 (MQ=255) cGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTcgtactgttctggcgaacccaatggcgccttgggtt < 2:249436‑M1/139‑37 (MQ=255) cGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTcgtactgttctggcgaacccaatggcgccttgggtt > 1:249436‑M1/1‑103 (MQ=255) ggCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAAtt > 2:217924/1‑146 (MQ=255) ggCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAAtt < 1:217924/146‑1 (MQ=255) aCCCCAGGTGCATGGCCCACAGCACCAGGGACATGGGTG‑TGGATGCGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGa > 1:308163/1‑150 (MQ=255) ccccAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAg > 1:149692/1‑150 (MQ=255) ccAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTcgtactgttctggcgaacccaatggcgccttgggt < 2:214100‑M1/110‑36 (MQ=255) ccAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTcgtactgttctggcgaacccaatggcgccttgggt > 1:214100‑M1/1‑75 (MQ=255) tGGCCGACAGCCAGAGGG‑CATAGCTGAACAACACGCAGAACCCTACGGACAACCCAA‑AGCGGCAGTGGGTCCGCCAGAACAGTACGAATGGCGCCCGCAGCGCTACGCTCGGGAACAACGGGAGTTGACAGGCGCTGAGCAGGGTCAGcc > 2:113774/1‑150 (MQ=255) aTACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCGGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCcaca < 1:193101/150‑1 (MQ=255) aCGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAgg < 1:96807/150‑1 (MQ=255) aCGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGCTTTGCCCCACAgg > 1:133555/1‑150 (MQ=255) gCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCa < 1:259654/107‑1 (MQ=255) gCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCa > 2:259654/1‑107 (MQ=255) cccTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGc > 2:239569/1‑150 (MQ=255) gCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCg > 1:86552/1‑150 (MQ=255) ccAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGt > 1:402756/1‑150 (MQ=255) cAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTc < 2:402756/150‑1 (MQ=255) aaCCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGaatggcgccttgggttggcggtagggttctgcgtattgttcagctatgccctggtgctgtgggccatgcacctggggtcagtggccgaagcggcggcactgcg > 1:249436‑M2/1‑36 (MQ=255) aaCCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGaatggcgccttgggttggcggtagggttctgcgtattgttcagctatgccctggtgctgtgggccatgcacctggggtcagtggccgaagcggcggcactgcg < 2:249436‑M2/139‑104 (MQ=255) aCCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGaatggcgccttgggttggcggtagggttctgcgtattgttcagctatgccctggtgctgtgggccatgcacctgg < 2:214100‑M2/110‑76 (MQ=255) aCCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGaatggcgccttgggttggcggtagggttctgcgtattgttcagctatgccctggtgctgtgggccatgcacctgg > 1:214100‑M2/1‑35 (MQ=255) aa‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCa > 1:381425/1‑150 (MQ=255) gcgcCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCAGgt > 2:100079/1‑150 (MQ=255) ccATTcgtactgttctggcgaacccaatggcgccttgggttggcggtagggttctgcgtattgttcagctatgccctggtgctgtgggccatgcacctggggtcagtggccgaagcggcggcactgcgggagttgagcgtgatcctggtg < 2:193101‑M1/150‑146 (MQ=255) ccATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCAGGTGTa < 1:12599/150‑1 (MQ=255) ccATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCAGGTGTa < 1:239569/150‑1 (MQ=255) | CACCAGGATCACGCTCAACTCCCGCAGTGCCGCCGCTTCGGCCACTGACCCCAGGTGCATGGCCCACAGCACCAGGG‑CATAGCTGAACAATACGCAGAACCCTACCGCCAACCCAA‑GGCGCCATTGGGTTCGCCAGAACAGTACGAATGGCGCCCGCCGCGCTACGCTCGCCAACAACGGGAATTGCCAGGCGCTGAGCAGGGTCAGCCAGACCAGGTAATCCCACGGTTTGCCCCACAGGCGCACGGCCTGCCCGTCGAACCAGGTGTA > NC_002947/5665021‑5665290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |