| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5960859 | 21 (1.300) | 4 (0.260) | 3/244 | NT | 17.0% | intergenic (‑166/‑74) | cyaY/PP_5226 | frataxin/Lppl family lipoprotein |
| ? | NC_002947 | = 5960878 | 19 (1.230) | intergenic (‑185/‑55) | cyaY/PP_5226 | frataxin/Lppl family lipoprotein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CTTGCCGCCGAATGCAAAGGTTTAGCCGTTGCCTTCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGGGCTGCGCAGAGGCTAAGCATAGCCCGCCCGGCGGACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5960748‑5960859‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccggCGGCTTGCCTATGCAAGGACCGGTCCGCCGGGCGGGCTATGCTTAGCCTCTGCGCAGCCCCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTGAAGGCAACGGCTAAACCTTTGCATTCGGCGGCAAGCGCCCGTATCTTGCCCGG < NC_002947/5960878‑5960730 CTTGCCGCCGAATGCAAAGGTTTAGCCGTTGCCTTCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGGGCTGCGCAGAGGCTAAGCATAGCCCGCCCGGCGGACCGGCGGCTTGCCTATGCAAGGACCGGTCCGCC < 1:266000/141‑1CTTGCCGCCGAATGCAAAGGTTTAGCCGTTGCCTTCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGGGCTGCGCAGAGGCTAAGCATAGCCCGCCCGGCGGACCGGCGGCTTGCCTATGCAAGGACCGGTCCGCC > 2:266000/1‑141 CTTCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGGGCTGCGCAGAGGCTAAGCATAGCCCGCCCGGCGGACCGGCGGCTTGCCTATGCAAGGACCGGTCCGCC < 1:40986/109‑1 CTTCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGGGCTGCGCAGAGGCTAAGCATAGCCCGCCCGGCGGACCGGCGGCTTGCCTATGCAAGGACCGGTCCGCC > 2:40986/1‑109 GGCGGCTTGCCTATGCAAGGAGCGGTCGGCCGGGCGGGCTATGCTTAGCCTCTGCGCAGCCCCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTGAAGGCAACGGCTAAACCTTTGCATTCGGCGGCAAGCGCCCGTATCTTGCCCG > 2:262808/1‑150 GCGGCTTGCCTATGCAAGGACCGGTCCGCCGGGCGGGCTATGCTTAGCCTCTGCGCAGCCCCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTGAAGGCAACGGCTAAACCTTTGCATTCGGCGGCAAGCGCCCGTATCTTGCCCGG > 1:180395/1‑150 CTTGCCGCCGAATGCAAAGGTTTAGCCGTTGCCTTCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGGGCTGCGCAGAGGCTAAGCATAGCCCGCCCGGCGGACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5960748‑5960859‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccggCGGCTTGCCTATGCAAGGACCGGTCCGCCGGGCGGGCTATGCTTAGCCTCTGCGCAGCCCCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTGAAGGCAACGGCTAAACCTTTGCATTCGGCGGCAAGCGCCCGTATCTTGCCCGG < NC_002947/5960878‑5960730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |