New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 42614430 (1.550)4 (0.220) 4/246 NT 11.7% coding (1658/2433 nt) PP_0350 ferrichrome‑iron receptor
?NC_002947 = 426167 32 (1.740)coding (1635/2433 nt) PP_0350 ferrichrome‑iron receptor

TCCGAGGCCGACACACTGGCATTGCTGGACGGCTGGAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/425991‑426144
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaagaCTGGGTGCACACCGGCACCAAGTTCTTCAACCAGGGCGATGCCACCAATACCCAGCGGGACAAGAAGTTCAGCGGCAACGCAGCCATCAGCTACGTGTTCGACTCGGGCTTCGTGCCGTACCTGTCCTATGCCGAGTCGTTCCAGC  <  NC_002947/426167‑426022
                                                                                                                                                                                                                                                                                                            
TCCGAGGCCGACACACTGGCATTGCTGGACGGCTGGAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTG                                                                                                                                                        >  2:378037/1‑150
                                                  GGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAA                                                                                                                                                      <  1:467792/102‑1
                                                  GGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAA                                                                                                                                                      >  2:467792/1‑102
                                                                     CCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGACTGGGTGCACACCGGCACCAAGTTCTTCAACCA                                                                                                                   <  1:173243/118‑1
                                                                     CCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGACTGGGTGCACACCGGCACCAAGTTCTTCAACCA                                                                                                                   >  2:173243/1‑118
                                                                       CGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGACTGGGTGCACACCGGCACCAAGTTCTTCAA                                                                                                                      >  1:248268/1‑113
                                                                       CGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGACTGGGTGCACACCGGCACCAAGTTCTTCAA                                                                                                                      <  2:248268/113‑1
                                                                                                                                                      AAGACTGGGTGCACACCGGCACCAAGTTCTTCAACCAGGGCGATGCCACCAATACCCAGCGGGACAAGAAGTTCAGCGGCAACGCAGCCATCAGCTACGTGTTCGACTCGGGCTTCGTGCCGTACCTGTCCTATGCCGAGTCGTTCCAGC  >  2:202058/1‑150
                                                                                                                                                                                                                                                                                                            
TCCGAGGCCGACACACTGGCATTGCTGGACGGCTGGAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/425991‑426144
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaagaCTGGGTGCACACCGGCACCAAGTTCTTCAACCAGGGCGATGCCACCAATACCCAGCGGGACAAGAAGTTCAGCGGCAACGCAGCCATCAGCTACGTGTTCGACTCGGGCTTCGTGCCGTACCTGTCCTATGCCGAGTCGTTCCAGC  <  NC_002947/426167‑426022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.