New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 426144	30 (1.550)	4 (0.220)	4/246	NT	11.7%	coding (1658/2433 nt)	PP_0350	ferrichrome‑iron receptor
	?	NC_002947	= 426167	32 (1.740)					coding (1635/2433 nt)	PP_0350	ferrichrome‑iron receptor

GCTGGAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGAT  >  NC_002947/426022‑426292                                                                                                                           |                                                                                                                                                     gCTGGAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGtctt                                                                                                                           >  2:202058‑M2/1‑146 (MQ=255)    ggAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCAc                                                                                                                        <  2:185848/150‑1 (MQ=255)    ggAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCAc                                                                                                                        >  2:145422/1‑150 (MQ=255)            tCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCa                                                                                                                                    <  2:459525/130‑1 (MQ=255)            tCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCa                                                                                                                                    >  1:459525/1‑130 (MQ=255)                cATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAggg                                                                                                            >  1:367008/1‑150 (MQ=255)                 aTAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGt                                                                                                           >  1:464453/1‑150 (MQ=255)                          gTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCa                                                                                                  >  1:340314/1‑150 (MQ=255)                                    aatcccGAGTCGAACACGTAGCTGATGGCTGCCTTTCCGCTGGACTTCTTGTCCCTCTGGGTATTGGTGTGATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGTAGCCAGTCTTCCCGACCGCCCCGGGTCAGGCTCCGGTTACCAAgc                                                                                        <  2:13516/147‑1 (MQ=255)                                       cccGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGActgggtgcacaccggcaccaagttcttcaacca                                                                                                                     >  2:173243‑M1/1‑85 (MQ=255)                                       cccGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGActgggtgcacaccggcaccaagttcttcaacca                                                                                                                     <  1:173243‑M1/118‑34 (MQ=255)                                         cGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGActgggtgcacaccggcaccaagttcttcaa                                                                                                                        >  1:248268‑M1/1‑83 (MQ=255)                                         cGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGActgggtgcacaccggcaccaagttcttcaa                                                                                                                        <  2:248268‑M1/113‑31 (MQ=255)                                         cGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCAt                                                                                   <  2:367008/150‑1 (MQ=255)                                               gAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAgc                                                                                        <  1:210944/139‑1 (MQ=255)                                               gAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAgc                                                                                        >  2:210944/1‑139 (MQ=255)                                                 acacGTAGCTGCCGCCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCt                                                                           <  1:346148/150‑1 (MQ=255)                                                    cGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGca                                                                        <  1:145422/150‑1 (MQ=255)                                                      tAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGcaca                                                                      >  2:111668/1‑150 (MQ=255)                                                            aTGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCAt                                                                                   <  2:230823/131‑1 (MQ=255)                                                            aTGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCAt                                                                                   >  1:230823/1‑131 (MQ=255)                                                             tGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGc                                                               <  1:111668/150‑1 (MQ=255)                                                                 tGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGt                                                           >  1:248804/1‑150 (MQ=255)                                                                   cGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCt                                                         >  1:284137/1‑150 (MQ=255)                                                                          gCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGt                                                  >  1:79724/1‑150 (MQ=255)                                                                                 ttcttGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTgg                                           >  1:219100/1‑150 (MQ=255)                                                                                 ttcttGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTgg                                           >  2:347763/1‑150 (MQ=255)                                                                                  tcttGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGt                                          <  2:248804/150‑1 (MQ=255)                                                                                   cttGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGCGCACTCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGtt                                         <  1:5282/150‑1 (MQ=255)                                                                                      gTCACGCTGGGTATTGGTGGGATCGCCCTGGTTTAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTa                                      <  1:378037/150‑1 (MQ=255)                                                                                             tGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTaa                               >  1:122651/1‑150 (MQ=255)                                                                                                   ttGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAAcgcg                         >  1:366130/1‑150 (MQ=255)                                                                                                         gCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCa                                                                                                  >  1:341059/1‑71 (MQ=255)                                                                                                         gCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCa                                                                                                  <  2:341059/71‑1 (MQ=255)                                                                                                                  tGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGtcttcaaccagggcgatgccaccaatacccagcgggacaagaagttcagcggcaacgcagccatcagctacgtgttcgactcggg                                          >  2:173243‑M2/1‑33 (MQ=255)                                                                                                                  tGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGtcttcaaccagggcgatgccaccaatacccagcgggacaagaagttcagcggcaacgcagccatcagctacgtgttcgactcggg                                          <  1:173243‑M2/118‑86 (MQ=255)                                                                                                                    gTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTGCTGTTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCg        >  1:150802/1‑150 (MQ=255)                                                                                                                     ttGAAGAACTTGGTGCCGGTGTGCACCCAGtcttcaaccagggcgatgccaccaatacccagcgggacaagaagttcagcggcaacgcagccatcagctacgtgttcgactcg                                            <  2:248268‑M2/113‑84 (MQ=255)                                                                                                                     ttGAAGAACTTGGTGCCGGTGTGCACCCAGtcttcaaccagggcgatgccaccaatacccagcgggacaagaagttcagcggcaacgcagccatcagctacgtgttcgactcg                                            >  1:248268‑M2/1‑30 (MQ=255)                                                                                                                        aagaaCTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTg    <  2:150802/150‑1 (MQ=255)                                                                                                                        aaGActgggtgcacaccggcaccaagttcttcaaccagggcgatgccaccaatacccagcgggacaagaagttcagcggcaacgcagccatcagctacgtgttcgactcgggcttcgtgccgtacctgtcctatgccgagtcgttccagc    >  2:202058‑M1/1‑4 (MQ=255)                                                                                                                          gaaCTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGAt  >  2:405977/1‑150 (MQ=255)                                                                                                                           |                                                                                                                                                     GCTGGAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGAT  >  NC_002947/426022‑426292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.