New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 42614430 (1.550)4 (0.220) 4/246 NT 11.7% coding (1658/2433 nt) PP_0350 ferrichrome‑iron receptor
?NC_002947 = 426167 32 (1.740)coding (1635/2433 nt) PP_0350 ferrichrome‑iron receptor

GCTGGAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGACCGGGTTGTT  >  NC_002947/426022‑426316
                                                                                                                                                 |                                                                                                                                                     
gCTGGAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGtctt                                                                                                                                                   >  2:202058‑M2/1‑146 (MQ=255)
   ggAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCAc                                                                                                                                                >  2:145422/1‑150 (MQ=255)
   ggAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCAc                                                                                                                                                <  2:185848/150‑1 (MQ=255)
               cATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAggg                                                                                                                                    >  1:367008/1‑150 (MQ=255)
                aTAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGt                                                                                                                                   >  1:464453/1‑150 (MQ=255)
                         gTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCa                                                                                                                          >  1:340314/1‑150 (MQ=255)
                                   aatcccGAGTCGAACACGTAGCTGATGGCTGCCTTTCCGCTGGACTTCTTGTCCCTCTGGGTATTGGTGTGATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGTAGCCAGTCTTCCCGACCGCCCCGGGTCAGGCTCCGGTTACCAAgc                                                                                                                <  2:13516/147‑1 (MQ=255)
                                        cGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCAt                                                                                                           <  2:367008/150‑1 (MQ=255)
                                              gAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAgc                                                                                                                <  1:210944/139‑1 (MQ=255)
                                              gAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAgc                                                                                                                >  2:210944/1‑139 (MQ=255)
                                                acacGTAGCTGCCGCCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCt                                                                                                   <  1:346148/150‑1 (MQ=255)
                                                   cGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGca                                                                                                <  1:145422/150‑1 (MQ=255)
                                                     tAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGcaca                                                                                              >  2:111668/1‑150 (MQ=255)
                                                           aTGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCAt                                                                                                           <  2:230823/131‑1 (MQ=255)
                                                           aTGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCAt                                                                                                           >  1:230823/1‑131 (MQ=255)
                                                            tGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGc                                                                                       <  1:111668/150‑1 (MQ=255)
                                                                tGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGt                                                                                   >  1:248804/1‑150 (MQ=255)
                                                                  cGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCt                                                                                 >  1:284137/1‑150 (MQ=255)
                                                                         gCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGt                                                                          >  1:79724/1‑150 (MQ=255)
                                                                                ttcttGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTgg                                                                   >  1:219100/1‑150 (MQ=255)
                                                                                ttcttGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTgg                                                                   >  2:347763/1‑150 (MQ=255)
                                                                                 tcttGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGt                                                                  <  2:248804/150‑1 (MQ=255)
                                                                                  cttGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGCGCACTCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGtt                                                                 <  1:5282/150‑1 (MQ=255)
                                                                                     gTCACGCTGGGTATTGGTGGGATCGCCCTGGTTTAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTa                                                              <  1:378037/150‑1 (MQ=255)
                                                                                            tGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTaa                                                       >  1:122651/1‑150 (MQ=255)
                                                                                                  ttGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAAcgcg                                                 >  1:366130/1‑150 (MQ=255)
                                                                                                        gCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCa                                                                                                                          >  1:341059/1‑71 (MQ=255)
                                                                                                        gCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCa                                                                                                                          <  2:341059/71‑1 (MQ=255)
                                                                                                                 tGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGtcttcaaccagggcgatgccaccaatacccagcgggacaagaagttcagcggcaacgcagccatcagctacgtgttcgactcggg                                                                  >  2:173243‑M2/1‑33 (MQ=255)
                                                                                                                 tGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGtcttcaaccagggcgatgccaccaatacccagcgggacaagaagttcagcggcaacgcagccatcagctacgtgttcgactcggg                                                                  <  1:173243‑M2/118‑86 (MQ=255)
                                                                                                                   gTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTGCTGTTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCg                                >  1:150802/1‑150 (MQ=255)
                                                                                                                    ttGAAGAACTTGGTGCCGGTGTGCACCCAGtcttcaaccagggcgatgccaccaatacccagcgggacaagaagttcagcggcaacgcagccatcagctacgtgttcgactcg                                                                    <  2:248268‑M2/113‑84 (MQ=255)
                                                                                                                    ttGAAGAACTTGGTGCCGGTGTGCACCCAGtcttcaaccagggcgatgccaccaatacccagcgggacaagaagttcagcggcaacgcagccatcagctacgtgttcgactcg                                                                    >  1:248268‑M2/1‑30 (MQ=255)
                                                                                                                       aagaaCTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTg                            <  2:150802/150‑1 (MQ=255)
                                                                                                                         gaaCTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGAt                          >  2:405977/1‑150 (MQ=255)
                                                                                                                                  gCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGccc                 <  2:464453/150‑1 (MQ=255)
                                                                                                                                      gtgtGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAg             >  1:395595/1‑150 (MQ=255)
                                                                                                                                         tgCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGAcc          <  1:347763/150‑1 (MQ=255)
                                                                                                                                         tgCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGAcc          <  2:395595/150‑1 (MQ=255)
                                                                                                                                                 gTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGACCGGgttgtt  <  2:340314/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
GCTGGAACGACTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGACCGGGTTGTT  >  NC_002947/426022‑426316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.