| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5201627 = | 29 (0.700) | 12 (0.400) | 12/196 | 1.6 | 48.9% | intergenic (‑65/‑115) | PP_4582/PP_4583 | membrane protein/putative Peptidase |
| ? | NC_002947 | 5201722 = | 4 (0.130) | intergenic (‑160/‑20) | PP_4582/PP_4583 | membrane protein/putative Peptidase | |||||
CCAGGCATACGGGTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5201804‑5201627‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAAGC > NC_002947/5201722‑5201869 CCAGGCATACGGGTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAATCCGCCTCCAACTGAGTGCGTACCGCGGAAGGAGCGGGg > 2:997268/1‑149 atcgGGGTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTCGGCATTGGAGGTCTCTTGATTGGAGTTCCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGAGCGCACCGAGGTAGGAGCGGGTTTACCC < 1:233969/146‑1 ACGGGTCGGTGGCCGGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGC < 1:477200/150‑1 GGTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGC > 2:599881/1‑147 GGTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGC < 1:599881/147‑1 GGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAGACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCG > 1:208761/1‑136 GGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAGACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCG < 2:208761/136‑1 GCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAG < 2:608878/130‑1 GCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAG > 1:608878/1‑130 TTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAA < 2:1004939/116‑1 TTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAA > 1:1004939/1‑116 ATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGC < 1:366959/115‑1 ATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGC > 2:366959/1‑115 ATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGG > 1:842698/1‑73 ATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGG < 2:842698/73‑1 CCTGTGCCGGCCTCTTCACGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGA > 2:606570/1‑150 TCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAA < 1:68150/118‑1 TCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAA > 2:68150/1‑118 AAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCT < 1:606570/150‑1 ACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAAC < 1:880269/95‑1 ACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAAC > 2:880269/1‑95 CCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAA > 1:211108/1‑76 CCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAA < 2:211108/76‑1 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAG < 1:500000/78‑1 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAG > 2:500000/1‑78 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTA < 1:474362/40‑1 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTA > 2:474362/1‑40 CAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCC > 1:932127/1‑101 CAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCC < 2:932127/101‑1 GGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTAC > 2:401735/1‑150 ACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACA > 1:204712/1‑117 ACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACA < 2:204712/117‑1 CCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCAGCCTTGCCCCGAGGTACTCGCTTACCTGCAA < 1:541759/150‑1 CCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGTCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAG > 2:761336/1‑150 GCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGC > 1:909335/1‑77 GCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGC < 2:909335/77‑1 aCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGC > 2:968281/2‑150 CCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGACAACTAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCTACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCC > 1:897900/1‑150 CGGCACAGGCAACTCCAATCAAGAGACGTTCAATGCCAACCAAGCACCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCAGAGGTACTCGCTCACCGGCACGCTGAAAACGCCc > 2:59999/1‑149 AGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGG > 2:73734/1‑150 AGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGG > 1:810895/1‑150 GGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGA > 1:749878/1‑150 CAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAAG < 2:810895/150‑1 AACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAAGC < 1:968281/150‑1 CCAGGCATACGGGTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5201804‑5201627‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAAGC > NC_002947/5201722‑5201869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |