| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5201627 = | 29 (0.700) | 12 (0.400) | 12/196 | 1.6 | 48.9% | intergenic (‑65/‑115) | PP_4582/PP_4583 | membrane protein/putative Peptidase |
| ? | NC_002947 | 5201722 = | 4 (0.130) | intergenic (‑160/‑20) | PP_4582/PP_4583 | membrane protein/putative Peptidase | |||||
GCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAAGC > NC_002947/5201591‑5201869 | accTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGCCCTCTTCGTGTGTAAATCCCCGCCTGCTTCGATGCGATCCCTGTTGGAGCGCACTGGCCCGCGAAGGGGCCGGCACAGGTGACTCTAATGCagagcctttt > 1:880255/2‑144 (MQ=255) GCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAAt < 1:366959‑M1/115‑1 (MQ=255) GCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAAt > 2:366959‑M1/1‑115 (MQ=255) cctgtgccggcctcttcacgggtaaacccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGa > 2:606570‑M2/93‑150 (MQ=255) CGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTCTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGccc > 1:208761‑M1/1‑136 (MQ=255) CGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTCTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGccc < 2:208761‑M1/136‑1 (MQ=255) CTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGc < 2:608878‑M1/130‑1 (MQ=255) CTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGc > 1:608878‑M1/1‑130 (MQ=255) tcttcgcgggtaaacccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCaa > 2:68150‑M2/81‑118 (MQ=255) tcttcgcgggtaaacccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCaa < 1:68150‑M2/38‑1 (MQ=255) TTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCaa > 1:1004939‑M1/1‑116 (MQ=255) TTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCaa < 2:1004939‑M1/116‑1 (MQ=255) GCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCCGGCCACCGACCCGt < 1:477200‑M1/150‑1 (MQ=255) GCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGAcc < 1:599881‑M1/147‑1 (MQ=255) GCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGAcc > 2:599881‑M1/1‑147 (MQ=255) GGGTAAACCCGCTCCTACCTCGGTGCGCTCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGGAACTCCAATCAAGAGACCTCCAATGCCGACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCAccgaccccgat < 1:233969‑M1/150‑5 (MQ=255) aaacccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCt < 1:606570‑M2/81‑1 (MQ=255) cCCCGCTCCTTCCGCGGTACGCACTCAGTTGGAGGCGGATTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTgg > 2:997268‑M1/2‑150 (MQ=255) acccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGccaac < 1:880269‑M2/28‑1 (MQ=255) acccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGccaac > 2:880269‑M2/68‑95 (MQ=255) cccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCaa > 1:211108‑M2/67‑76 (MQ=255) cccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCaa < 2:211108‑M2/10‑1 (MQ=255) CCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAAt < 2:842698‑M1/73‑1 (MQ=255) CCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAAt > 1:842698‑M1/1‑73 (MQ=255) ccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAagag > 2:500000‑M2/66‑78 (MQ=255) ccgctccaacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAagag < 1:500000‑M2/13‑1 (MQ=255) caacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAAcccc < 2:932127‑M2/42‑1 (MQ=255) caacagggatcgcaccgaggtaggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAAcccc > 1:932127‑M2/60‑101 (MQ=255) gTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAg > 2:157530/1‑113 (MQ=255) gTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAg < 1:157530/113‑1 (MQ=255) gTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGaca > 2:639429/1‑150 (MQ=255) ggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTAc > 2:401735‑M2/32‑150 (MQ=255) acccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACa < 2:204712‑M2/91‑1 (MQ=255) acccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACa > 1:204712‑M2/27‑117 (MQ=255) cccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCAGCCTTGCCCCGAGGTACTCGCTTACCTGCaa < 1:541759‑M2/125‑1 (MQ=255) ccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGTCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAg > 2:761336‑M2/25‑150 (MQ=255) gcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGc < 2:909335‑M2/55‑1 (MQ=255) gcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGc > 1:909335‑M2/23‑77 (MQ=255) accggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGc > 2:968281‑M2/15‑150 (MQ=255) ccggcacaggcaaCTCCAATCAAGAGACCTTCAATGACAACTAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCTACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGcc > 1:897900‑M2/14‑150 (MQ=255) cggcacaggcaaCTCCAATCAAGAGACGTTCAATGCCAACCAAGCACCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCAGAGGTACTCGCTCACCGGCACGCTGAAAACgccc > 2:59999‑M2/13‑149 (MQ=255) aggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAgg > 2:73734‑M2/7‑150 (MQ=255) aggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAgg > 1:810895‑M2/7‑150 (MQ=255) ggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGa > 1:749878‑M2/6‑150 (MQ=255) caaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAAg < 2:810895‑M2/147‑1 (MQ=255) aaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAAGc < 1:968281‑M2/148‑1 (MQ=255) | GCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAAGC > NC_002947/5201591‑5201869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |