New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 590696 =38 (1.350)3 (0.110) 3/240 NT 7.9% coding (817/885 nt) PP_0500 dTDP‑4‑rhamnose reductase‑like protein
?NC_002947 590734 = 33 (1.200)coding (855/885 nt) PP_0500 dTDP‑4‑rhamnose reductase‑like protein

TACGGCGTAGCCTTTGTCCAACAACGCATCGCACAGGTGGGAGCCAATGAAGCCGGCACCGCCGGTGATCAGGATGGGGGCGTCAGCCATGGCGGTAGAACCGGTCCAGTAGAGGTGGCAAGCCAGCGCGCCAGGCACGCGGCTTGATACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/590846‑590696
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accTCTACTGGACCGGTTCTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAGGCTACGCCGTAC  >  NC_002947/590734‑590847
                                                                                                                                                                                                                                                                         
TACGGCGTAGCCTTTGTCCAACAACGCATCGCACAGGTGGGAGCCAATGAAGCCGGCACCGCCGGTGATCAGGATGGGGGCGTCAGCCATGGCGGTAGAACCGGTCCAGTAGAGGTGGCAAGCCAGCGCGCCAAGTACGCGGCTTGATAC                                                                                                                     <  1:215538/150‑1
 ACGGCGTAGCCTTTGTCCAACAACGCATCGCACAGGTGGGAGCCAATGAAGCCGGCACCGCCGGTGATCAGGATGGGGGCGTCAGCCATGGCGGTAGAACCGGTCCAGTAGAGGTGGCAAGCCAGCGCGCCAGGCACGCGGCTTGATACC                                                                                                                    >  2:749663/1‑150
                                                                                                                 GGTGGCAAGCCAGCGCGCCAGGCACGCGGCTTGATACCTCTACTGGACCGGTTCTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAGGCTACGCCGT    >  2:433568/1‑150
                                                                                                                  GTGGCAAGCCAGCGCGCCAGGCACGCGGCTTGATACCTCTACTGGACCGGTTCTACCGCCATGGCTGATGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAGGCTACGCCGTA   >  1:96653/1‑150
                                                                                                                   TGGCAAGCCAGCGCGCCAGGCACGCGGCTTGATACCTCTACTGGACCGGTTCTACCGCCATGGCTGATGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAGGCTACGCCGTAC  <  2:96653/150‑1
                                                                                                                                                    ACCTCTACTGGACCGGTTCTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTT                                                    <  1:213297/67‑1
                                                                                                                                                    ACCTCTACTGGACCGGTTCTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTT                                                    >  2:213297/1‑67
                                                                                                                                                                                                                                                                         
TACGGCGTAGCCTTTGTCCAACAACGCATCGCACAGGTGGGAGCCAATGAAGCCGGCACCGCCGGTGATCAGGATGGGGGCGTCAGCCATGGCGGTAGAACCGGTCCAGTAGAGGTGGCAAGCCAGCGCGCCAGGCACGCGGCTTGATACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/590846‑590696
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accTCTACTGGACCGGTTCTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAGGCTACGCCGTAC  >  NC_002947/590734‑590847

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.