| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1436861 = | 35 (1.240) | 3 (0.110) | 3/236 | NT | 8.5% | coding (210/948 nt) | PP_1257 | 1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
| ? | NC_002947 | 1436901 = | 31 (1.150) | coding (170/948 nt) | PP_1257 | 1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase | |||||
GCTGCTGACAGAGGCCGAGCGCCAGGAGGGCGTGGCGCGCCTGGTGGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1436912‑1436861‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccTCTGTCAGCAGCGGCCAGTCACCCATCGAGCCGCAGTACACCACCGCGCTCATGCCGGCCTCGATCAGCTCGCGGCCCTTGCGCACCAGGGCGTCGAA > NC_002947/1436901‑1436998 GCTGCTGACAGAGGCCGAGCGCCAGGAGGGCGTGGCGCGCCTGGTGGCGGCCTCTGTCAGCAGCGGCCAGTCACCCATCGAGCCGCAGTACACCACCGCGCTCATGCCGGCCTCGATCAGCTCGCGGCCCTTGCGCACCAGGGCGTCGAA > 1:21355/1‑150 GCCGAGCGCCAGGAGGGCGTGGCGCGCCTGGTGGCGGCCTCTGTCAGCAGCGGCCAGTCACCCATCGAGCCGCAGTACACCACCGCGCTCATGCCGGC > 1:127456/1‑98 GCCGAGCGCCAGGAGGGCGTGGCGCGCCTGGTGGCGGCCTCTGTCAGCAGCGGCCAGTCACCCATCGAGCCGCAGTACACCACCGCGCTCATGCCGGC < 2:127456/98‑1 GCTGCTGACAGAGGCCGAGCGCCAGGAGGGCGTGGCGCGCCTGGTGGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1436912‑1436861‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccTCTGTCAGCAGCGGCCAGTCACCCATCGAGCCGCAGTACACCACCGCGCTCATGCCGGCCTCGATCAGCTCGCGGCCCTTGCGCACCAGGGCGTCGAA > NC_002947/1436901‑1436998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |