| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1666839 | 19 (0.670) | 4 (0.160) | 4/214 | NT | 17.6% | intergenic (‑69/‑202) | PP_1460/ffh | membrane protein/signal recognition particle GTPase subunit |
| ? | NC_002947 | = 1666868 | 21 (0.860) | intergenic (‑98/‑173) | PP_1460/ffh | membrane protein/signal recognition particle GTPase subunit | |||||
GCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1666778‑1666839‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaggATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCT < NC_002947/1666868‑1666722 GCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCAC < 1:354320/114‑1GCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCAC > 2:354320/1‑114 TGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGA > 1:296606/1‑84 TGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGA < 2:296606/84‑1 GCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAG > 2:345300/1‑150 CCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTAT < 1:627120/150‑1 ACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTT > 1:526658/1‑150 ACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTT > 2:426235/1‑150 AGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCT > 2:616768/1‑150 GCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1666778‑1666839‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaggATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCT < NC_002947/1666868‑1666722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |