New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1666839	19 (0.670)	4 (0.160)	4/214	NT	17.6%	intergenic (‑69/‑202)	PP_1460/ffh	membrane protein/signal recognition particle GTPase subunit
	?	NC_002947	= 1666868	21 (0.860)					intergenic (‑98/‑173)	PP_1460/ffh	membrane protein/signal recognition particle GTPase subunit

AGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGTTTCCCCCCTG  >  NC_002947/1666722‑1666997                                                                                                                                                   |                                                                                                                                  agaACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcct                                                                                                                                >  2:616768‑M2/1‑147 (MQ=255)   gacctAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAACGCTTGTGTCGGGGCATTCGTGGGCACGCCAGCTCCCACAGGTGTGGCGCAGGCCTGCAGGTAGTGAGGATCCtgt                                                                                                                              <  2:142179/146‑1 (MQ=255)   aaCATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgt                                                                                                                              >  2:426235‑M2/1‑145 (MQ=255)   aaCATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgt                                                                                                                              >  1:526658‑M2/1‑145 (MQ=255)      aTAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtggg                                                                                                                           <  1:627120‑M2/150‑9 (MQ=255)             cTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggc                                                                                                                    >  2:345300‑M2/1‑135 (MQ=255)                          cTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAaga                                                                                                       <  1:272506/150‑1 (MQ=255)                           tttAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCTGGCTCTCCCGCGAagag                                                                                                      <  2:559194/150‑1 (MQ=255)                               aaGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATTGGCCATGAGCGGGCGCGCCCGCGAAGAGGCCa                                                                                                  <  1:19469/150‑1 (MQ=255)                               aaGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGAGGTAGGCTCGATCGTATGGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCa                                                                                                  >  2:19469/1‑150 (MQ=255)                                             ggtagaGATTCCGGTGATCACGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACTGaa                                                                                    <  2:79630/145‑1 (MQ=255)                                                         gCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGGTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAgg                                                                        >  1:350831/1‑150 (MQ=255)                                                          cTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCTCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGgt                                                                       >  1:543142/1‑150 (MQ=255)                                                           tGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTAc                                                                             <  1:47665/143‑1 (MQ=255)                                                           tGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTAc                                                                             >  2:47665/1‑143 (MQ=255)                                                                         tGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGc                                                        >  2:213720/1‑150 (MQ=255)                                                                                ttGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGAGCCAGTGGGAGCGGGCGCGCCCGCGAAGAGGACAGCACAGCCACAGAATATCTACCAAGGTGTGCGTCGTCGCTTAACttacc                                                 >  2:253298/1‑147 (MQ=39)                                                                                 tgtgTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGCGCGGGCGCGCCCGCGAAGATGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCt                                                <  1:280838/150‑1 (MQ=255)                                                                                    atCGGGGGATCCGTTTGCGCGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCtata                                             >  2:186446/2‑150 (MQ=39)                                                                                         ggCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATcgc                                        >  1:146083/1‑150 (MQ=255)                                                                                                gTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagc                                                                     <  1:354320‑M2/114‑63 (MQ=255)                                                                                                gTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagc                                                                     >  2:354320‑M2/1‑52 (MQ=255)                                                                                                          ccGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCta                                               <  1:463910/126‑1 (MQ=255)                                                                                                          ccGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCta                                               >  2:463910/1‑126 (MQ=255)                                                                                                          ccGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGGGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGCGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGCTGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCcgg                       >  2:250552/1‑150 (MQ=255)                                                                                                              tCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttca                                                                                     >  1:296606‑M2/1‑38 (MQ=255)                                                                                                              tCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttca                                                                                     <  2:296606‑M2/84‑47 (MQ=255)                                                                                                                    aGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGgtgtgt              >  2:445115/1‑149 (MQ=255)                                                                                                                    aGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGgtgtgt              <  1:445115/149‑1 (MQ=255)                                                                                                                          ggCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGTTTccc       <  1:213720/150‑1 (MQ=255)                                                                                                                               aGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGTTTCCCCCCTg  <  1:186446/150‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                  AGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGTTTCCCCCCTG  >  NC_002947/1666722‑1666997

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.