| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1666839 | 19 (0.670) | 4 (0.160) | 4/214 | NT | 17.6% | intergenic (‑69/‑202) | PP_1460/ffh | membrane protein/signal recognition particle GTPase subunit |
| ? | NC_002947 | = 1666868 | 21 (0.860) | intergenic (‑98/‑173) | PP_1460/ffh | membrane protein/signal recognition particle GTPase subunit | |||||
ATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTG > NC_002947/1666694‑1666986 | aTCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATg > 2:526658/1‑150 (MQ=255) tggATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAATGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGcc > 1:345300/2‑150 (MQ=255) agaACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcct > 2:616768‑M2/1‑147 (MQ=255) gacctAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAACGCTTGTGTCGGGGCATTCGTGGGCACGCCAGCTCCCACAGGTGTGGCGCAGGCCTGCAGGTAGTGAGGATCCtgt < 2:142179/146‑1 (MQ=255) aaCATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgt > 2:426235‑M2/1‑145 (MQ=255) aaCATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgt > 1:526658‑M2/1‑145 (MQ=255) aTAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtggg < 1:627120‑M2/150‑9 (MQ=255) cTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggc > 2:345300‑M2/1‑135 (MQ=255) cTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAaga < 1:272506/150‑1 (MQ=255) tttAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCTGGCTCTCCCGCGAagag < 2:559194/150‑1 (MQ=255) aaGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATTGGCCATGAGCGGGCGCGCCCGCGAAGAGGCCa < 1:19469/150‑1 (MQ=255) aaGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGAGGTAGGCTCGATCGTATGGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCa > 2:19469/1‑150 (MQ=255) ggtagaGATTCCGGTGATCACGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACTGaa < 2:79630/145‑1 (MQ=255) gCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGGTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAgg > 1:350831/1‑150 (MQ=255) gCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGatcctcactacctgcaggcctgcgccatacctgtgggagcgggcgtgcccac > 2:354320‑M1/1‑62 (MQ=255) gCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGatcctcactacctgcaggcctgcgccatacctgtgggagcgggcgtgcccac < 1:354320‑M1/114‑53 (MQ=255) cTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCTCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGgt > 1:543142/1‑150 (MQ=255) tGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTAc > 2:47665/1‑143 (MQ=255) tGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTAc < 1:47665/143‑1 (MQ=255) tGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGatcctcactacctgcaggcctgcgccatacctgtggga > 1:296606‑M1/1‑46 (MQ=255) tGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGatcctcactacctgcaggcctgcgccatacctgtggga < 2:296606‑M1/84‑39 (MQ=255) tGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGc > 2:213720/1‑150 (MQ=255) ttGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGAGCCAGTGGGAGCGGGCGCGCCCGCGAAGAGGACAGCACAGCCACAGAATATCTACCAAGGTGTGCGTCGTCGCTTAACttacc > 2:253298/1‑147 (MQ=39) tgtgTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGCGCGGGCGCGCCCGCGAAGATGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCt < 1:280838/150‑1 (MQ=255) atCGGGGGATCCGTTTGCGCGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCtata > 2:186446/2‑150 (MQ=39) ggCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATcgc > 1:146083/1‑150 (MQ=255) gTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagc < 1:354320‑M2/114‑63 (MQ=255) gTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagc > 2:354320‑M2/1‑52 (MQ=255) gCCCGCTCCCACAGGatcctcactacctgcaggcctgcgccatacctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccag > 2:345300‑M1/1‑15 (MQ=255) ccGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCta > 2:463910/1‑126 (MQ=255) ccGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCta < 1:463910/126‑1 (MQ=255) ccGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGGGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGCGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGCTGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCcgg > 2:250552/1‑150 (MQ=255) tCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttca < 2:296606‑M2/84‑47 (MQ=255) tCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttca > 1:296606‑M2/1‑38 (MQ=255) cccACAGGatcctcactacctgcaggcctgcgccatacctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggacttat < 1:627120‑M1/150‑143 (MQ=255) acaGGatcctcactacctgcaggcctgcgccatacctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggacttatgtt > 2:426235‑M1/1‑5 (MQ=255) acaGGatcctcactacctgcaggcctgcgccatacctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggacttatgtt > 1:526658‑M1/1‑5 (MQ=255) aGGatcctcactacctgcaggcctgcgccatacctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggacttatgttct > 2:616768‑M1/1‑3 (MQ=255) aGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGgtgtgt > 2:445115/1‑149 (MQ=255) aGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGgtgtgt < 1:445115/149‑1 (MQ=255) | ATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTG > NC_002947/1666694‑1666986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |