New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1768621	33 (1.170)	4 (0.150)	4/236	NT	10.9%	coding (180/480 nt)	PP_1578	hypothetical protein
	?	NC_002947	= 1768635	34 (1.260)					coding (194/480 nt)	PP_1578	hypothetical protein

TCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1768560‑1768621 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgTCGTCGTTGCG‑CGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGTGG  <  NC_002947/1768635‑1768521                                                                                                                                                                                    TCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGTCGTCGTTGCG‑CGCCGGCAG                                                                                                 >  1:371189/1‑82 TCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGTCGTCGGTGCG‑CGCCGGCAG                                                                                                 <  2:371189/82‑1                                            CATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGTGG  >  1:574029/1‑134                                            CATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGTGG  <  2:574029/134‑1                                                                                                                                                                                    TCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1768560‑1768621 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgTCGTCGTTGCG‑CGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGTGG  <  NC_002947/1768635‑1768521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.