| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1768621 | 33 (1.170) | 4 (0.150) | 4/236 | NT | 10.9% | coding (180/480 nt) | PP_1578 | hypothetical protein |
| ? | NC_002947 | = 1768635 | 34 (1.260) | coding (194/480 nt) | PP_1578 | hypothetical protein | |||||
CATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGTGCACCGGCCCATGC > NC_002947/1768486‑1768779 | cattcatGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACCCTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAacgacga < 1:281276/150‑1 (MQ=255) cTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGGACCCAGGAt < 2:687813/150‑1 (MQ=255) tCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATc > 2:120858/1‑150 (MQ=255) agaTCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGa < 2:147328/150‑1 (MQ=255) agaTCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGa < 1:278465/150‑1 (MQ=255) ggATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTaa < 1:4669/150‑1 (MQ=255) ccaccTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGTCGTCGTTGCG‑CGCcggcagggccaagtccatg < 2:574029‑M2/134‑20 (MQ=255) ccaccTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGTCGTCGTTGCG‑CGCcggcagggccaagtccatg > 1:574029‑M2/1‑115 (MQ=255) caccTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACAt > 1:339587/1‑150 (MQ=255) cTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGa < 1:212629/150‑1 (MQ=255) cTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACgg < 2:434913/150‑1 (MQ=255) tGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTGCGCGCTAAGCAACATCGACGGCATCg > 1:43099/1‑150 (MQ=255) ccAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTCAGCAACATCGACgg < 1:188578/142‑1 (MQ=255) ccAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACgg > 2:188578/1‑142 (MQ=255) cAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCctc > 1:12586/1‑150 (MQ=255) aaGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTg > 2:159378/1‑150 (MQ=255) tGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTc < 1:120858/150‑1 (MQ=255) aCCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGc < 1:380151/123‑1 (MQ=255) aCCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGc > 2:380151/1‑123 (MQ=255) tCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGCACGTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTcc > 1:197167/1‑150 (MQ=255) tCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTcc > 1:560390/1‑150 (MQ=255) agaCAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCctc < 1:18645/118‑1 (MQ=255) agaCAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCctc > 2:18645/1‑118 (MQ=255) gaCAGGTCAGGTGGTGGTGTGCACGCCATGAGGCCCGTACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCg > 1:552278/1‑150 (MQ=255) tggtgTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTgg > 2:212264/1‑150 (MQ=255) gCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGCGTGTGGCTGGTCTACCgcgc > 1:38130/1‑150 (MQ=255) ccATGCGGCATGGACTTGGCCCTGCCGGCG‑AGCAACGAGGGCGGCACCCAGGATCTGCCCTTCGCGATAGGCAACGTCGACGGCATCGCCTCTGTCTTCGTCCGCGCAGCGCTCCGGCATGGGAGTCGAATCTCGCTGGTTGACCGCGcc > 2:161492/1‑150 (MQ=255) aTGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTa < 1:212264/150‑1 (MQ=255) aCTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTgg > 2:232190/1‑82 (MQ=255) aCTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTgg < 1:232190/82‑1 (MQ=255) cTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCcgacga > 2:734624/1‑150 (MQ=255) gCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTc > 1:303461/1‑150 (MQ=255) cTGCCGGCG‑CGCACCGACGAcggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacctgtctccagtgtga < 2:371189‑M2/82‑63 (MQ=255) cTGCCGGCG‑CGCAACGACGAcggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacctgtctccagtgtga > 1:371189‑M2/1‑20 (MQ=255) cTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGt > 2:752436/1‑150 (MQ=255) tGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGTg < 2:303461/150‑1 (MQ=255) g‑cgcAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGTGCACCGGc > 2:663241/1‑150 (MQ=255) cAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGTGCACCGGCCCa < 1:663241/150‑1 (MQ=255) cgacgacgGCACCCAGGATCTGACCTTCGCGATACGCGACAGCTACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGTGCACCGGCCCATGc < 2:552278/150‑1 (MQ=255) | CATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGTGCACCGGCCCATGC > NC_002947/1768486‑1768779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |