New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1768621	33 (1.170)	4 (0.150)	4/236	NT	10.9%	coding (180/480 nt)	PP_1578	hypothetical protein
	?	NC_002947	= 1768635	34 (1.260)					coding (194/480 nt)	PP_1578	hypothetical protein

CTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGTG  >  NC_002947/1768473‑1768766                                                                                                                                                     |                                                                                                                                                   ctGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCgg                                                                                                                                                   <  1:441422/150‑1 (MQ=255)           gaTCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAacga                                                                                                                                        >  1:687813/1‑150 (MQ=255)             tcattcatGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAacgacg                                                                                                                                      >  2:278465/1‑150 (MQ=255)              cattcatGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACCCTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAacgacga                                                                                                                                     <  1:281276/150‑1 (MQ=255)                           cTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGGACCCAGGAt                                                                                                                        <  2:687813/150‑1 (MQ=255)                            tCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATc                                                                                                                       >  2:120858/1‑150 (MQ=255)                               agaTCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGa                                                                                                                    <  2:147328/150‑1 (MQ=255)                               agaTCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGa                                                                                                                    <  1:278465/150‑1 (MQ=255)                                           ggATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTaa                                                                                                        <  1:4669/150‑1 (MQ=255)                                                 ccaccTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGTCGTCGTTGCG‑CGCcggcagggccaagtccatg                                                                                                                  <  2:574029‑M2/134‑20 (MQ=255)                                                 ccaccTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGTCGTCGTTGCG‑CGCcggcagggccaagtccatg                                                                                                                  >  1:574029‑M2/1‑115 (MQ=255)                                                  caccTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACAt                                                                                                 >  1:339587/1‑150 (MQ=255)                                                     cTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGa                                                                                              <  1:212629/150‑1 (MQ=255)                                                        cTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACgg                                                                                           <  2:434913/150‑1 (MQ=255)                                                             tGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTGCGCGCTAAGCAACATCGACGGCATCg                                                                                      >  1:43099/1‑150 (MQ=255)                                                                ccAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTCAGCAACATCGACgg                                                                                           <  1:188578/142‑1 (MQ=255)                                                                ccAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACgg                                                                                           >  2:188578/1‑142 (MQ=255)                                                                 cAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCctc                                                                                  >  1:12586/1‑150 (MQ=255)                                                                   aaGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTg                                                                                >  2:159378/1‑150 (MQ=255)                                                                        tGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTc                                                                           <  1:120858/150‑1 (MQ=255)                                                                                    aCCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGc                                                                                          >  2:380151/1‑123 (MQ=255)                                                                                    aCCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGc                                                                                          <  1:380151/123‑1 (MQ=255)                                                                                        tCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGtcgtcgttgcgcgccggcag                                                                                                                                >  1:371189‑M1/1‑62 (MQ=255)                                                                                        tCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGtcgtcggtgcgcgccggcag                                                                                                                                <  2:371189‑M1/82‑21 (MQ=255)                                                                                        tCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGCACGTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTcc                                                           >  1:197167/1‑150 (MQ=255)                                                                                        tCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTcc                                                           >  1:560390/1‑150 (MQ=255)                                                                                                 agaCAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCctc                                                                                  >  2:18645/1‑118 (MQ=255)                                                                                                 agaCAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCctc                                                                                  <  1:18645/118‑1 (MQ=255)                                                                                                  gaCAGGTCAGGTGGTGGTGTGCACGCCATGAGGCCCGTACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCg                                                 >  1:552278/1‑150 (MQ=255)                                                                                                                tggtgTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTgg                                   >  2:212264/1‑150 (MQ=255)                                                                                                                          gCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGCGTGTGGCTGGTCTACCgcgc                         >  1:38130/1‑150 (MQ=255)                                                                                                                           ccATGCGGCATGGACTTGGCCCTGCCGGCG‑AGCAACGAGGGCGGCACCCAGGATCTGCCCTTCGCGATAGGCAACGTCGACGGCATCGCCTCTGTCTTCGTCCGCGCAGCGCTCCGGCATGGGAGTCGAATCTCGCTGGTTGACCGCGcc                        >  2:161492/1‑150 (MQ=255)                                                                                                                             aTGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTa                      <  1:212264/150‑1 (MQ=255)                                                                                                                                   cATGGACTTGGCCCTGCCGgcgcgcaacgacgacggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacctgtctccagtgtgatggtcagttcgtcccagcctttggtcatccagtaggtgg                                 <  2:574029‑M1/134‑116 (MQ=255)                                                                                                                                   cATGGACTTGGCCCTGCCGgcgcgcaacgacgacggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacctgtctccagtgtgatggtcagttcgtcccagcctttggtcatccagtaggtgg                                 >  1:574029‑M1/1‑19 (MQ=255)                                                                                                                                        aCTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTgg                                                                               >  2:232190/1‑82 (MQ=255)                                                                                                                                        aCTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTgg                                                                               <  1:232190/82‑1 (MQ=255)                                                                                                                                         cTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCcgacga          >  2:734624/1‑150 (MQ=255)                                                                                                                                             gCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTc      >  1:303461/1‑150 (MQ=255)                                                                                                                                                cTGCCGGCG‑CGCACCGACGAcggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacctgtctccagtgtga                                                                       <  2:371189‑M2/82‑63 (MQ=255)                                                                                                                                                cTGCCGGCG‑CGCAACGACGAcggcagggccaagtccatgccgcatggcgtgcacaccaccacctgacctgtctccagtgtga                                                                       >  1:371189‑M2/1‑20 (MQ=255)                                                                                                                                                cTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGt   >  2:752436/1‑150 (MQ=255)                                                                                                                                                 tGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGTg  <  2:303461/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CTGGCCCGGAGATCATTCATGAAGTGCTCGAGATCACCGATGGGATCACCACCTACTGGATGACCAAAGGCTGGGACGAACTGACCATCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGTG  >  NC_002947/1768473‑1768766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.