| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3233587 = | 11 (0.390) | 4 (0.150) | 4/230 | NT | 26.4% | coding (732/948 nt) | GbpR | galactose‑binding protein regulator |
| ? | NC_002947 | 3233624 = | 12 (0.460) | coding (769/948 nt) | GbpR | galactose‑binding protein regulator | |||||
GCACGCCGAGGTTGGCCATCGCCAGTGGCAACTCCACCGGCAGGACGGCGACCATGCCATAGCGGGCATAATGCTGGGCCACGTCATTGGGCACCACCGCAATCATTTCGGACGCTTCGAGCATGGCAGTGGTCGCCAGGATCGAAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3233735‑3233587‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaagcgTCCGAAATGATTGCGGTGGTGCCCAATGACGTGGCCCAGCATTATGCCCGCTATGGCATGGTCGCCGTCCTGCCGGTGGAGTTGCCACTGGCGATGGCCAACCTCGGCGTGCTGACCCTGCGCTCGCGGCCCAACTCGGTTGCCCTTGA > NC_002947/3233624‑3233772 GCACGCCGAGGTTGGCCATCGCCAGTGGCAACTCCACCGGCAGGACGGCGACCATGCCATAGCGGGCATAATGCTGGGCCACGTCATTGGGCACCACCGCAATCATTTCGGACGCTTCGAGCATGGCAGTGGTCGCCAGGATC < 1:341412/143‑1GCACGCCGAGGTTGGCCATCGCCAGTGGCAACTCCACCGGCAGGACGGCGACCATGCCATAGCGGGCATAATGCTGGGCCACGTCATTGGGCACCACCGCAATCATTTCGGACGCTTCGAGCATGGCAGTGGTCGCCAGGATC > 2:341412/1‑143 GTTGGCCATCGCCAGTGGCAACTCCACCGGCAGGACGGCGACCATGCCATAGCGGGCATAATGCTGGGCCACGTCATTGGGCACCACCGCAATCATTTCGGACGCTTCGAGCATGGCAGTGGTCGCCAGGATCGAA > 1:247076/1‑136 GTTGGCCATCGCCAGTGGCAACTCCACCGGCAGGACGGCGACCATGCCATAGCGGGCATAATGCTGGGCCACGTCATTGGGCACCACCGCAATCATTTCGGACGCTTCGAGCATGGCAGTGGTCGCCAGGATCGAA < 2:247076/136‑1 GCAACTCCACCGGCAGGACGGCGACCGTGCCATAGCGGGCATAATGCTTGGCCACGTCATTGGGCACCACCGCAATCATTTCGGACGCTTCGATCCTGGCGACCACTGCCATGCTCGAAGCGTCCGAAATGATTGCGGTGGT > 2:365226/1‑142 ACCACCGCAATCATTTCGGACGCTTCGAGCATGGCAGTGGTCGCCAGGATCGAAGCGTCCGAAATGATTGCGGTGGTGCCCAATGACGTGGCCAAGCATTATGCCCGCTATGGCACGGTCGCCGTCCTGCCGGTGGAGTTGC > 1:365226/1‑142 TTCGAGCATGGCAGTGGTCGCCAGGATCGAAGCGTCCGAAATGATTGCGGTGGTGCCCAATGACGTGGCCCAGCATTATGCCCGCTATGGCATGGTCGCCGTCCTGCCGG < 1:282881/110‑1 TTCGAGCATGGCAGTGGTCGCCAGGATCGAAGCGTCCGAAATGATTGCGGTGGTGCCCAATGACGTGGCCCAGCATTATGCCCGCTATGGCATGGTCGCCGTCCTGCCGG > 2:282881/1‑110 GTCCGAAATGATTGCGGTGGTGCCCAATGACGTGGCCCAGCATTATGCCCGCTATGGCATGGTCGCCGTCCTGCCGGTGGAGTTGCCACTGGCGATGGCCAACCTCGGCGTGCTGACCCTGCGCTCGCGGCCCAACTCGGTTGCCCTTGA < 1:595116/150‑1 GCACGCCGAGGTTGGCCATCGCCAGTGGCAACTCCACCGGCAGGACGGCGACCATGCCATAGCGGGCATAATGCTGGGCCACGTCATTGGGCACCACCGCAATCATTTCGGACGCTTCGAGCATGGCAGTGGTCGCCAGGATCGAAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3233735‑3233587‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaagcgTCCGAAATGATTGCGGTGGTGCCCAATGACGTGGCCCAGCATTATGCCCGCTATGGCATGGTCGCCGTCCTGCCGGTGGAGTTGCCACTGGCGATGGCCAACCTCGGCGTGCTGACCCTGCGCTCGCGGCCCAACTCGGTTGCCCTTGA > NC_002947/3233624‑3233772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |